RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 PRTFDC1Q9NRG1 225 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 ENOPH1Q9UHY7 261 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 IFT52Q9Y366 437 aa11.91□□□□□ -0.5
VAPB-203ENST00000463370 EML5Q05BV3 1969 aa11.9□□□□□ -0.5
VAPB-203ENST00000463370 A8MU76 341 aa11.9□□□□□ -0.5
VAPB-203ENST00000463370 PIP5K1CO60331 668 aa11.9□□□□□ -0.5
VAPB-203ENST00000463370 ENTPD6O75354 484 aa11.9□□□□□ -0.5
VAPB-203ENST00000463370 HTR2AP28223 471 aa11.9□□□□□ -0.5
VAPB-203ENST00000463370 NFATC3Q12968 1075 aa11.9□□□□□ -0.5
VAPB-203ENST00000463370 DOC2BQ14184 412 aa11.9□□□□□ -0.5
VAPB-203ENST00000463370 SPCS2Q15005 226 aa11.9□□□□□ -0.5
VAPB-203ENST00000463370 NNATQ16517 81 aa11.9□□□□□ -0.5
VAPB-203ENST00000463370 CTF1Q16619 201 aa11.9□□□□□ -0.5
VAPB-203ENST00000463370 WDR45BQ5MNZ6 344 aa11.9□□□□□ -0.5
VAPB-203ENST00000463370 SYT6Q5T7P8 510 aaPredicted RBP11.9□□□□□ -0.5
VAPB-203ENST00000463370 SLX4IPQ5VYV7 408 aa11.9□□□□□ -0.5
VAPB-203ENST00000463370 C12orf73Q69YU5 71 aa11.9□□□□□ -0.5
VAPB-203ENST00000463370 PLEKHM3Q6ZWE6 761 aa11.9□□□□□ -0.5
VAPB-203ENST00000463370 GDF7Q7Z4P5 450 aa11.9□□□□□ -0.5
VAPB-203ENST00000463370 C11orf74Q86VG3 221 aa11.9□□□□□ -0.5
VAPB-203ENST00000463370 TMEM255BQ8WV15 326 aa11.9□□□□□ -0.5
VAPB-203ENST00000463370 RBM18Q96H35 190 aaKnown RBP11.9□□□□□ -0.5
VAPB-203ENST00000463370 FAM46AQ96IP4 442 aaKnown RBP11.9□□□□□ -0.5
VAPB-203ENST00000463370 RAB33BQ9H082 229 aa11.9□□□□□ -0.5
VAPB-203ENST00000463370 CCNB1IP1Q9NPC3 277 aa11.9□□□□□ -0.5
VAPB-203ENST00000463370 KLHL28Q9NXS3 571 aa11.9□□□□□ -0.5
VAPB-203ENST00000463370 DNAJC27Q9NZQ0 273 aa11.9□□□□□ -0.5
VAPB-203ENST00000463370 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.9□□□□□ -0.5
VAPB-203ENST00000463370 SATB2Q9UPW6 733 aa11.9□□□□□ -0.5
VAPB-203ENST00000463370 FITM1A5D6W6 292 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 NUDT21O43809 227 aaKnown RBP11.9□□□□□ -0.51
VAPB-203ENST00000463370 BRINP1O60477 761 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 KCNK2O95069 426 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 NKX2-2O95096 273 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 CDK1P06493 297 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 CCNA2P20248 432 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 CD1CP29017 333 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 STT3AP46977 705 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 OR1D4P47884 311 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 EPHA4P54764 986 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 IGLV3-21P80748 117 aaPredicted RBP11.9□□□□□ -0.51
VAPB-203ENST00000463370 ST3GAL4Q11206 333 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 ZNF267Q14586 743 aaPredicted RBP11.9□□□□□ -0.51
VAPB-203ENST00000463370 LARS2Q15031 903 aaKnown RBP11.9□□□□□ -0.51
VAPB-203ENST00000463370 ACSM5Q6NUN0 579 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 CD300LDQ6UXZ3 194 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 NPSR1Q6W5P4 371 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 TTLL10Q6ZVT0 673 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 GATAD2AQ86YP4 633 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 UBALD2Q8IYN6 164 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 SDR16C5Q8N3Y7 309 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 RAB2BQ8WUD1 216 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 HOXB13Q92826 284 aaPredicted RBP11.9□□□□□ -0.51
VAPB-203ENST00000463370 SLC38A4Q969I6 547 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 SLC41A3Q96GZ6 507 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 VSTM2LQ96N03 204 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 FOLH1BQ9HBA9 442 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 NECTIN3Q9NQS3 549 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 DHCR7Q9UBM7 475 aaKnown RBP11.9□□□□□ -0.51
VAPB-203ENST00000463370 NDOR1Q9UHB4 597 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 ENPP5Q9UJA9 477 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 ASXL3Q9C0F0 2248 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 CACNA1IQ9P0X4 2223 aa11.9□□□□□ -0.51
VAPB-203ENST00000463370 TMEM150CB9EJG8 249 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 AGRPO00253 132 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 AP3D1O14617 1153 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 CDK4P11802 303 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 NID1P14543 1247 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 OMPP47874 163 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 PGDP52209 483 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 CSNK2BP67870 215 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 POU6F2P78424 691 aaPredicted RBP11.89□□□□□ -0.51
VAPB-203ENST00000463370 ST3GAL3Q11203 375 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 TRAM2Q15035 370 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 ZCCHC12Q6PEW1 402 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 ZNF730Q6ZMV8 503 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 ZNF595Q8IYB9 648 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 OR6C4Q8NGE1 309 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 OR8D4Q8NGM9 314 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 YIPF6Q96EC8 236 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 CNPPD1Q9BV87 410 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 SLC7A7Q9UM01 511 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 ZNF232Q9UNY5 417 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 THADAQ6YHU6 1953 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 PRKYO43930 277 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 ADAM11O75078 769 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 THBS1P07996 1170 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 FOLR1P15328 257 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 ALAS2P22557 587 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 GPR3P46089 330 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 GPR4P46093 362 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 DHPSP49366 369 aaPredicted RBP11.89□□□□□ -0.51
VAPB-203ENST00000463370 EFNA3P52797 238 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 LSM3P62310 102 aaKnown RBP11.89□□□□□ -0.51
VAPB-203ENST00000463370 GARNL3Q5VVW2 1013 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 WDR88Q6ZMY6 472 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 ANKRD13BQ86YJ7 626 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 TCEANCQ8N8B7 351 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 OR1L3Q8NH93 324 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 ELF4Q99607 663 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms