RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 RFESDQ8TAC1 157 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 VN1R17PQ8TDU5 208 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 SENP8Q96LD8 212 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 CRACR2AQ9BSW2 395 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 DUSP16Q9BY84 665 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 OPN3Q9H1Y3 402 aaPredicted RBP2.41□□□□□ -2.02
HDAC6-212ENST00000461608 RMND5AQ9H871 391 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 GNB4Q9HAV0 340 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 ADGRL4Q9HBW9 690 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 ELOVL2Q9NXB9 296 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 ZNF581Q9P0T4 197 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 CGNQ9P2M7 1197 aaKnown RBP2.41□□□□□ -2.02
HDAC6-212ENST00000461608 EXTL2Q9UBQ6 330 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 ZNF346Q9UL40 294 aaKnown RBP2.41□□□□□ -2.02
HDAC6-212ENST00000461608 OR10H1Q9Y4A9 318 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 RNF115Q9Y4L5 304 aa2.41□□□□□ -2.02
HDAC6-212ENST00000461608 RPL37AP8A6NKH3 93 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 KRTAP16-1A8MUX0 517 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 SHISA9B4DS77 424 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 E9PAM4 449 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 H0YCG3 227 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 SDHDO14521 159 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 ADCY5O95622 1261 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 CLUP10909 449 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 PRG2P13727 222 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 TBXA2RP21731 343 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 ATP5A1P25705 553 aaKnown RBP2.4□□□□□ -2.03
HDAC6-212ENST00000461608 PSMA5P28066 241 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 IFNAR2P48551 515 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 FNTAP49354 379 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 PPT1P50897 306 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 ARHGDIBP52566 201 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 RAG2P55895 527 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 RIPPLY1Q0D2K3 151 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 RFTN1Q14699 578 aaPredicted RBP2.4□□□□□ -2.03
HDAC6-212ENST00000461608 PDK3Q15120 406 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 LTB4RQ15722 352 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 PPP1R3AQ16821 1122 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 CYP51A1Q16850 503 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 ANKDD1AQ495B1 522 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 NADK2Q4G0N4 442 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 C14orf177Q52M58 125 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 NHLRC3Q5JS37 347 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 RABGAP1LQ5R372 815 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 SPATA46Q5T0L3 261 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 OR8G2PQ6IF36 304 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 SULT1C3Q6IMI6 304 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 PNCKQ6P2M8 343 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 ZNF600Q6ZNG1 722 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 DPY19L4Q7Z388 723 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 ERASQ7Z444 233 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 ZDHHC21Q8IVQ6 265 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 SPEM1Q8N4L4 309 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 C15orf54Q8N8G6 183 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 SYT14Q8NB59 555 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 SPRYD4Q8WW59 207 aaPredicted RBP2.4□□□□□ -2.03
HDAC6-212ENST00000461608 ITLN1Q8WWA0 313 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 ART4Q93070 314 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 DNAJA3Q96EY1 480 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 C1orf147Q96MC9 270 aaPredicted RBP2.4□□□□□ -2.03
HDAC6-212ENST00000461608 CASD1Q96PB1 797 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 TESK2Q96S53 571 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 OMDQ99983 421 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 RPP25Q9BUL9 199 aaKnown RBP2.4□□□□□ -2.03
HDAC6-212ENST00000461608 HCAR1Q9BXC0 346 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 GFRA4Q9GZZ7 299 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 RAB33BQ9H082 229 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 DHX33Q9H6R0 707 aaKnown RBP2.4□□□□□ -2.03
HDAC6-212ENST00000461608 GPN2Q9H9Y4 310 aaPredicted RBP2.4□□□□□ -2.03
HDAC6-212ENST00000461608 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.4□□□□□ -2.03
HDAC6-212ENST00000461608 ZNF446Q9NWS9 450 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 DUSP12Q9UNI6 340 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 MAB21L2Q9Y586 359 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 GMPPBQ9Y5P6 360 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 KLF2Q9Y5W3 355 aaPredicted RBP2.4□□□□□ -2.03
HDAC6-212ENST00000461608 MAD1L1Q9Y6D9 718 aa2.4□□□□□ -2.03
HDAC6-212ENST00000461608 TDRD15B5MCY1 1934 aaKnown RBP2.39□□□□□ -2.03
HDAC6-212ENST00000461608 SLC17A2O00624 439 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 CASKO14936 926 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 PI15O43692 258 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 DUX1O43812 170 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 BCAS1O75363 584 aaPredicted RBP2.39□□□□□ -2.03
HDAC6-212ENST00000461608 GJB5O95377 273 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 JCHAINP01591 159 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 HBQ1P09105 142 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 FAM200BP0CF97 657 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 RPA2P15927 270 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 GCFC2P16383 781 aaKnown RBP2.39□□□□□ -2.03
HDAC6-212ENST00000461608 PGCP20142 388 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 SHC1P29353 583 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 CHI3L1P36222 383 aaPredicted RBP2.39□□□□□ -2.03
HDAC6-212ENST00000461608 GNPDA1P46926 289 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 ALDH3B2P48448 385 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 GBX2P52951 348 aaPredicted RBP2.39□□□□□ -2.03
HDAC6-212ENST00000461608 CBX1P83916 185 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 SPIBQ01892 262 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 PLOD1Q02809 727 aaPredicted RBP2.39□□□□□ -2.03
HDAC6-212ENST00000461608 PUDPQ08623 228 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 CD300CQ08708 224 aa2.39□□□□□ -2.03
HDAC6-212ENST00000461608 SNTB2Q13425 540 aaKnown RBP2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms