RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 EFCAB10A6NFE3 127 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 SLC9B1P1A6NJY1 282 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 SGK494L7N484 410 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 FCMRO60667 390 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 LDB3O75112 727 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 RDH16O75452 317 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 SOX30O94993 753 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 ALOX5P09917 674 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 SLC35E2P0CK97 266 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 PIPP12273 146 aaPredicted RBP15.73■□□□□ 0.11
YIPF3-205ENST00000460547 GSTM3P21266 225 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 NT5EP21589 574 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 MMP11P24347 488 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 IFNA8P32881 189 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 HNRNPKP61978 463 aaKnown RBP eCLIP15.73■□□□□ 0.11
YIPF3-205ENST00000460547 ID2Q02363 134 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 TRAM2Q15035 370 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 DEFB110Q30KQ9 67 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 OGFOD3Q6PK18 319 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 WDR53Q7Z5U6 358 aaPredicted RBP15.73■□□□□ 0.11
YIPF3-205ENST00000460547 ZER1Q7Z7L7 766 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 HMGN2P46Q86SG4 172 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 SAP25Q8TEE9 199 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 SLC38A4Q969I6 547 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 ZG16BQ96DA0 208 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 SDF2Q99470 211 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 RAB33BQ9H082 229 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 CLN6Q9NWW5 311 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 DOLKQ9UPQ8 538 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 GPR55Q9Y2T6 319 aaPredicted RBP15.73■□□□□ 0.11
YIPF3-205ENST00000460547 TMEM131Q92545 1883 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 CCDC88CQ9P219 2028 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 ASCC3Q8N3C0 2202 aaKnown RBP15.73■□□□□ 0.11
YIPF3-205ENST00000460547 AGAP5A6NIR3 686 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 TMX2-CTNND1H3BSU7 103 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 SLC22A1O15245 554 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 AQP9O43315 295 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 CBFA2T3O75081 653 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 BCAS1O75363 584 aaPredicted RBP15.73■□□□□ 0.11
YIPF3-205ENST00000460547 PSMB9P28065 219 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 EPHA8P29322 1005 aaPredicted RBP15.73■□□□□ 0.11
YIPF3-205ENST00000460547 IFNGR2P38484 337 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 GABRA4P48169 554 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 TAS2R41P59536 307 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 ST3GAL3Q11203 375 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 IRF3Q14653 427 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 LARS2Q15031 903 aaKnown RBP15.73■□□□□ 0.11
YIPF3-205ENST00000460547 SHBQ15464 509 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 TMEM236Q5W0B7 351 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 CCDC81Q6ZN84 652 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 PTCHD4Q6ZW05 846 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 SIMC1Q8NDZ2 872 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 OR9A4Q8NGU2 314 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 C9orf43Q8TAL5 461 aaPredicted RBP15.73■□□□□ 0.11
YIPF3-205ENST00000460547 SH3GL3Q99963 347 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 POLR2J2Q9GZM3 115 aaKnown RBP15.73■□□□□ 0.11
YIPF3-205ENST00000460547 NECTIN3Q9NQS3 549 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 POLE3Q9NRF9 147 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 STARD5Q9NSY2 213 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 ZNF232Q9UNY5 417 aa15.73■□□□□ 0.11
YIPF3-205ENST00000460547 TLCD2A6NGC4 264 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 CHST10O43529 356 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 KIAA0513O60268 411 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 TPST2O60704 377 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 COQ9O75208 318 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 CYP7B1O75881 506 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 OR5F1O95221 314 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 BCL10O95999 233 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 GUSBP08236 651 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 RNH1P13489 461 aaKnown RBP15.72■□□□□ 0.11
YIPF3-205ENST00000460547 POU1F1P28069 291 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 SLC15A1P46059 708 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 EPHA4P54764 986 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 RGS8P57771 180 aaPredicted RBP15.72■□□□□ 0.11
YIPF3-205ENST00000460547 EEF1A1P68104 462 aaKnown RBP15.72■□□□□ 0.11
YIPF3-205ENST00000460547 IGLV3-21P80748 117 aaPredicted RBP15.72■□□□□ 0.11
YIPF3-205ENST00000460547 FOXC1Q12948 553 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 AQP6Q13520 282 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 DCTN2Q13561 401 aaKnown RBP15.72■□□□□ 0.11
YIPF3-205ENST00000460547 FAM53BQ14153 422 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 DCST2Q5T1A1 773 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 GARNL3Q5VVW2 1013 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 P2RY8Q86VZ1 359 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 ZNF619Q8N2I2 560 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 Q96MT0 163 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 SLC38A3Q99624 504 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 MAP3K3Q99759 626 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 ADAP2Q9NPF8 381 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 EPHA6Q9UF33 1036 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 MKLN1Q9UL63 735 aa15.72■□□□□ 0.11
YIPF3-205ENST00000460547 A0A087WUU8 490 aa15.71■□□□□ 0.11
YIPF3-205ENST00000460547 M0R129 80 aa15.71■□□□□ 0.11
YIPF3-205ENST00000460547 AP3D1O14617 1153 aa15.71■□□□□ 0.11
YIPF3-205ENST00000460547 SDC3O75056 442 aa15.71■□□□□ 0.11
YIPF3-205ENST00000460547 STX11O75558 287 aa15.71■□□□□ 0.11
YIPF3-205ENST00000460547 SOX14O95416 240 aa15.71■□□□□ 0.11
YIPF3-205ENST00000460547 NSA2O95478 260 aaKnown RBP15.71■□□□□ 0.11
YIPF3-205ENST00000460547 DBIP07108 87 aaKnown RBP15.71■□□□□ 0.11
YIPF3-205ENST00000460547 CCNYL3P0C7X3 344 aa15.71■□□□□ 0.11
YIPF3-205ENST00000460547 ZNF182P17025 639 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms