RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 ALOXE3Q9BYJ1 711 aa18.59■□□□□ 0.57
SNX27-204ENST00000458013 PRSS21Q9Y6M0 314 aa18.59■□□□□ 0.57
SNX27-204ENST00000458013 DBHP09172 617 aa18.59■□□□□ 0.57
SNX27-204ENST00000458013 ZNF43P17038 809 aa18.59■□□□□ 0.57
SNX27-204ENST00000458013 XCR1P46094 333 aa18.59■□□□□ 0.57
SNX27-204ENST00000458013 RPS5P46782 204 aaKnown RBP18.59■□□□□ 0.57
SNX27-204ENST00000458013 PTPRRQ15256 657 aa18.59■□□□□ 0.57
SNX27-204ENST00000458013 RNASE10Q5GAN6 216 aaKnown RBP18.59■□□□□ 0.57
SNX27-204ENST00000458013 CCNJQ5T5M9 372 aa18.59■□□□□ 0.57
SNX27-204ENST00000458013 DESI1Q6ICB0 168 aa18.59■□□□□ 0.57
SNX27-204ENST00000458013 CPOQ8IVL8 374 aa18.59■□□□□ 0.57
SNX27-204ENST00000458013 CACNG6Q9BXT2 260 aa18.59■□□□□ 0.57
SNX27-204ENST00000458013 ACTRT3Q9BYD9 372 aa18.59■□□□□ 0.57
SNX27-204ENST00000458013 ZNF160Q9HCG1 818 aa18.59■□□□□ 0.57
SNX27-204ENST00000458013 GCM1Q9NP62 436 aa18.59■□□□□ 0.57
SNX27-204ENST00000458013 GPATCH2Q9NW75 528 aa18.59■□□□□ 0.57
SNX27-204ENST00000458013 NPIPB15A6NHN6 443 aaPredicted RBP18.59■□□□□ 0.57
SNX27-204ENST00000458013 ZNF705FA8MVS1 300 aaPredicted RBP18.59■□□□□ 0.57
SNX27-204ENST00000458013 C17orf105B2RV13 164 aa18.59■□□□□ 0.57
SNX27-204ENST00000458013 VEGFDO43915 354 aa18.59■□□□□ 0.57
SNX27-204ENST00000458013 ZNF705DP0CH99 300 aaPredicted RBP18.59■□□□□ 0.57
SNX27-204ENST00000458013 ZNF705BP0CI00 300 aaPredicted RBP18.59■□□□□ 0.57
SNX27-204ENST00000458013 PSMB5P28074 263 aa18.59■□□□□ 0.57
SNX27-204ENST00000458013 PRDX3P30048 256 aaKnown RBP18.59■□□□□ 0.57
SNX27-204ENST00000458013 THBS2P35442 1172 aa18.59■□□□□ 0.57
SNX27-204ENST00000458013 C7orf43Q8WVR3 580 aa18.59■□□□□ 0.57
SNX27-204ENST00000458013 SFXN1Q9H9B4 322 aa18.59■□□□□ 0.57
SNX27-204ENST00000458013 Q9Y3F1 56 aa18.59■□□□□ 0.57
SNX27-204ENST00000458013 TUBB3Q13509 450 aa18.58■□□□□ 0.57
SNX27-204ENST00000458013 GK3PQ14409 553 aa18.58■□□□□ 0.57
SNX27-204ENST00000458013 RPL13AP3Q6NVV1 102 aa18.58■□□□□ 0.57
SNX27-204ENST00000458013 TMEFF1Q8IYR6 380 aa18.58■□□□□ 0.57
SNX27-204ENST00000458013 MDGA1Q8NFP4 955 aa18.58■□□□□ 0.57
SNX27-204ENST00000458013 CHPT1Q8WUD6 406 aa18.58■□□□□ 0.57
SNX27-204ENST00000458013 CA5BQ9Y2D0 317 aa18.58■□□□□ 0.57
SNX27-204ENST00000458013 IFT172Q9UG01 1749 aa18.58■□□□□ 0.57
SNX27-204ENST00000458013 A0A0G2JMP0 313 aa18.58■□□□□ 0.57
SNX27-204ENST00000458013 POM121CA8CG34 1229 aa18.58■□□□□ 0.57
SNX27-204ENST00000458013 LILRB3O75022 631 aa18.58■□□□□ 0.57
SNX27-204ENST00000458013 DLSTP36957 453 aa18.58■□□□□ 0.57
SNX27-204ENST00000458013 EEF1A2Q05639 463 aaKnown RBP18.58■□□□□ 0.57
SNX27-204ENST00000458013 SPATS1Q496A3 300 aa18.58■□□□□ 0.57
SNX27-204ENST00000458013 OR4M2Q8NGB6 313 aa18.58■□□□□ 0.57
SNX27-204ENST00000458013 PAQR8Q8TEZ7 354 aa18.58■□□□□ 0.57
SNX27-204ENST00000458013 ZNF775Q96BV0 537 aaPredicted RBP18.58■□□□□ 0.57
SNX27-204ENST00000458013 PLEKHJ1Q9NW61 149 aa18.58■□□□□ 0.57
SNX27-204ENST00000458013 RETP07949 1114 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 RGS6P49758 472 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 PDZD9Q8IXQ8 264 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 GTPBP8Q8N3Z3 284 aaPredicted RBP18.58■□□□□ 0.56
SNX27-204ENST00000458013 OR4K5Q8NGD3 323 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 OR1S1Q8NH92 325 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 BORCS6Q96GS4 357 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 RANBP9Q96S59 729 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 CPEB1Q9BZB8 566 aaKnown RBP18.58■□□□□ 0.56
SNX27-204ENST00000458013 OR6C2Q9NZP2 312 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 SERPINA7P05543 415 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 IL4RP24394 825 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 CLCN2P51788 898 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 HTRA3P83110 453 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 AVL9Q8NBF6 648 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 OR56B2PQ8NGI1 322 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 OR8J1Q8NGP2 316 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 POC1BQ8TC44 478 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 F5H5P2 479 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 CLDN8P56748 225 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 RAB5BP61020 215 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 GAB1Q13480 694 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 MINDY1Q8N5J2 469 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 RRNAD1Q96FB5 475 aaKnown RBP18.58■□□□□ 0.56
SNX27-204ENST00000458013 MYNNQ9NPC7 610 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 RNF186Q9NXI6 227 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 RARRES3Q9UL19 164 aa18.58■□□□□ 0.56
SNX27-204ENST00000458013 G3V2L1 256 aa18.57■□□□□ 0.56
SNX27-204ENST00000458013 OXSR1O95747 527 aaPredicted RBP18.57■□□□□ 0.56
SNX27-204ENST00000458013 IQCF3P0C7M6 154 aa18.57■□□□□ 0.56
SNX27-204ENST00000458013 FGFBP1Q14512 234 aa18.57■□□□□ 0.56
SNX27-204ENST00000458013 OR9K2Q8NGE7 335 aa18.57■□□□□ 0.56
SNX27-204ENST00000458013 OR13J1Q8NGT2 312 aa18.57■□□□□ 0.56
SNX27-204ENST00000458013 SLC17A9Q9BYT1 436 aa18.57■□□□□ 0.56
SNX27-204ENST00000458013 FZD9O00144 591 aa18.57■□□□□ 0.56
SNX27-204ENST00000458013 LAMTOR5O43504 91 aa18.57■□□□□ 0.56
SNX27-204ENST00000458013 MAMDC2Q7Z304 686 aaPredicted RBP18.57■□□□□ 0.56
SNX27-204ENST00000458013 BBS1Q8NFJ9 593 aa18.57■□□□□ 0.56
SNX27-204ENST00000458013 TMEM40Q8WWA1 233 aa18.57■□□□□ 0.56
SNX27-204ENST00000458013 HS6ST2Q96MM7 605 aa18.57■□□□□ 0.56
SNX27-204ENST00000458013 MAGIXQ9H6Y5 334 aa18.57■□□□□ 0.56
SNX27-204ENST00000458013 A0A0A6YYC8 382 aaPredicted RBP18.57■□□□□ 0.56
SNX27-204ENST00000458013 I3L1I5 382 aaPredicted RBP18.57■□□□□ 0.56
SNX27-204ENST00000458013 SERPINA2P20848 420 aa18.57■□□□□ 0.56
SNX27-204ENST00000458013 PNCKQ6P2M8 343 aa18.57■□□□□ 0.56
SNX27-204ENST00000458013 PARP4Q9UKK3 1724 aaKnown RBP18.57■□□□□ 0.56
SNX27-204ENST00000458013 ARPC1BO15143 372 aaKnown RBP18.57■□□□□ 0.56
SNX27-204ENST00000458013 HOXB9P17482 250 aaPredicted RBP18.57■□□□□ 0.56
SNX27-204ENST00000458013 ZNF252P-AS1Q0IIN9 211 aa18.57■□□□□ 0.56
SNX27-204ENST00000458013 FAM198BQ6UWH4 519 aa18.57■□□□□ 0.56
SNX27-204ENST00000458013 ISCA2Q86U28 154 aa18.57■□□□□ 0.56
SNX27-204ENST00000458013 EGFL6Q8IUX8 553 aa18.57■□□□□ 0.56
SNX27-204ENST00000458013 ZNF619Q8N2I2 560 aa18.57■□□□□ 0.56
SNX27-204ENST00000458013 BEST4Q8NFU0 473 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms