RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 WDR77Q9BQA1 342 aaPredicted RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 MROH8Q9H579 483 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 GKN1Q9NS71 199 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 SEC14L4Q9UDX3 406 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 A4GNTQ9UNA3 340 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 SOCS6O14544 535 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 NPC1O15118 1278 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ARPC5O15511 151 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 SLC25A12O75746 678 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 RPP40O75818 363 aaKnown RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 PAPLNO95428 1278 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 HPP00738 406 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 IL6P05231 212 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 CPEP16870 476 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 PSMA3P25788 255 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 CD1CP29017 333 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 FNTBP49356 437 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 MEF2AQ02078 507 aaPredicted RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 HABP2Q14520 560 aaPredicted RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 SPATS1Q496A3 300 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ACER2Q5QJU3 275 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 CCNJQ5T5M9 372 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ELP2Q6IA86 826 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 PTCHD4Q6ZW05 846 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 TRIM69Q86WT6 500 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNF280BQ86YH2 543 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 UXS1Q8NBZ7 420 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 OR4Q3Q8NH05 313 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 NEIL3Q8TAT5 605 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 SLC38A5Q8WUX1 472 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 THEM6Q8WUY1 208 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 TSNARE1Q96NA8 513 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 SLC38A3Q99624 504 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 TSSK6Q9BXA6 273 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 TMEM231Q9H6L2 316 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 LYARQ9NX58 379 aaKnown RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 CNIH4Q9P003 139 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNF222Q9UK12 451 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 SATB2Q9UPW6 733 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 PCYT1BQ9Y5K3 369 aaPredicted RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 KCNE3Q9Y6H6 103 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 C4orf47A7E2U8 309 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 HCN1O60741 890 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 PRAMEF1O95521 474 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ZP3P21754 424 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 AHCYP23526 432 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 MC4RP32245 332 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 SLC11A2P49281 568 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 RGS4P49798 205 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 MEOX2P50222 304 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 SNRPEP62304 92 aaKnown RBP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 FUT5Q11128 374 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 MLLT11Q13015 90 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 FBXO43Q4G163 708 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 BEX5Q5H9J7 111 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 MORN4Q8NDC4 146 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 NUBPLQ8TB37 319 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 SLC22A8Q8TCC7 542 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 SELENOMQ8WWX9 145 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 KISS1RQ969F8 398 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 INTS12Q96CB8 462 aaKnown RBP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 BSCL2Q96G97 398 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ELF4Q99607 663 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 TRPV4Q9HBA0 871 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 HINT3Q9NQE9 182 aaKnown RBP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 STUB1Q9UNE7 303 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 KCNK7Q9Y2U2 307 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 DOPEY2Q9Y3R5 2298 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ZANQ9Y493 2812 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 GFYI3L273 518 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 CACNB4O00305 520 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 SIGLEC6O43699 453 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 FGBP02675 491 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 RAB3AP20336 220 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ELAVL4P26378 380 aaKnown RBP4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 MAPK1P28482 360 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ID4P47928 161 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 RENBPP51606 427 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 BLVRAP53004 296 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 DUSP2Q05923 314 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 SKP2Q13309 424 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 CLINT1Q14677 625 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 SYPL1Q16563 259 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 CDKN3Q16667 212 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNF284Q2VY69 593 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 XKR6Q5GH73 641 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 CLEC12AQ5QGZ9 265 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 SLC27A4Q6P1M0 643 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 C5orf46Q6UWT4 87 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 SLC29A4Q7RTT9 530 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 FAM26EQ8N5C1 309 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 SAMD12Q8N8I0 201 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 GPR156Q8NFN8 814 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 ZDHHC1Q8WTX9 485 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 KAT2AQ92830 837 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 MYLPFQ96A32 169 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 RGMAQ96B86 450 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 SLC38A2Q96QD8 506 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 GSDMCQ9BYG8 508 aa4.24□□□□□ -1.73
DEPDC1-202ENST00000456315 TM6SF2Q9BZW4 377 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms