RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 CADM2Q8N3J6 435 aa12.72□□□□□ -0.37
CLK3-203ENST00000454830 CADM4Q8NFZ8 388 aa12.72□□□□□ -0.37
CLK3-203ENST00000454830 TMEM255BQ8WV15 326 aa12.72□□□□□ -0.37
CLK3-203ENST00000454830 ANKRD9Q96BM1 317 aaPredicted RBP12.72□□□□□ -0.37
CLK3-203ENST00000454830 GPA33Q99795 319 aa12.72□□□□□ -0.37
CLK3-203ENST00000454830 TSSK6Q9BXA6 273 aa12.72□□□□□ -0.37
CLK3-203ENST00000454830 TBC1D23Q9NUY8 699 aa12.72□□□□□ -0.37
CLK3-203ENST00000454830 SYT5O00445 386 aa12.72□□□□□ -0.37
CLK3-203ENST00000454830 PRKAR1BP31321 381 aa12.72□□□□□ -0.37
CLK3-203ENST00000454830 AFF3P51826 1226 aaKnown RBP12.72□□□□□ -0.37
CLK3-203ENST00000454830 NXPH1P58417 271 aa12.72□□□□□ -0.37
CLK3-203ENST00000454830 BNC1Q01954 994 aa12.72□□□□□ -0.37
CLK3-203ENST00000454830 TMED1Q13445 227 aa12.72□□□□□ -0.37
CLK3-203ENST00000454830 AQP6Q13520 282 aa12.72□□□□□ -0.37
CLK3-203ENST00000454830 WDR45BQ5MNZ6 344 aa12.72□□□□□ -0.37
CLK3-203ENST00000454830 OR4N2Q8NGD1 307 aa12.72□□□□□ -0.37
CLK3-203ENST00000454830 NDNFQ8TB73 568 aa12.72□□□□□ -0.37
CLK3-203ENST00000454830 ZHX1-C8orf76Q96EF9 292 aa12.72□□□□□ -0.37
CLK3-203ENST00000454830 MAN2C1Q9NTJ4 1040 aa12.72□□□□□ -0.37
CLK3-203ENST00000454830 RNF215Q9Y6U7 377 aa12.72□□□□□ -0.37
CLK3-203ENST00000454830 EFCAB10A6NFE3 127 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 PIP5K1CO60331 668 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 COQ9O75208 318 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 PTHP01270 115 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 SLC35E2P0CK97 266 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 TGFBR1P36897 503 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 ARMCX4Q5H9R4 360 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.71□□□□□ -0.37
CLK3-203ENST00000454830 C1orf189Q5VU69 101 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 SLC30A6Q6NXT4 461 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 GJD3Q8N144 294 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 OR51Q1Q8NH59 317 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 LRR1Q96L50 414 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 CHCHD6Q9BRQ6 235 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 REV1Q9UBZ9 1251 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 ASCC3Q8N3C0 2202 aaKnown RBP12.71□□□□□ -0.37
CLK3-203ENST00000454830 TLCD2A6NGC4 264 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 AIREO43918 545 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 PLOD3O60568 738 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 PIAS2O75928 621 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 GIPRP48546 466 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 PRAMEF8Q5VWM4 474 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 PRAMEF7Q5VXH5 474 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 ACSM5Q6NUN0 579 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 SMARCD3Q6STE5 483 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 HSDL2Q6YN16 418 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 OR8J1Q8NGP2 316 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 TEX12Q9BXU0 123 aa12.71□□□□□ -0.37
CLK3-203ENST00000454830 DBIP07108 87 aaKnown RBP12.71□□□□□ -0.38
CLK3-203ENST00000454830 DBTP11182 482 aaKnown RBP12.71□□□□□ -0.38
CLK3-203ENST00000454830 GNSP15586 552 aa12.71□□□□□ -0.38
CLK3-203ENST00000454830 PI4KAP42356 2102 aa12.71□□□□□ -0.38
CLK3-203ENST00000454830 CCR4P51679 360 aa12.71□□□□□ -0.38
CLK3-203ENST00000454830 SMSP52788 366 aa12.71□□□□□ -0.38
CLK3-203ENST00000454830 STARD6P59095 220 aa12.71□□□□□ -0.38
CLK3-203ENST00000454830 NR1D2Q14995 579 aa12.71□□□□□ -0.38
CLK3-203ENST00000454830 PDZK1Q5T2W1 519 aa12.71□□□□□ -0.38
CLK3-203ENST00000454830 SLC36A4Q6YBV0 504 aa12.71□□□□□ -0.38
CLK3-203ENST00000454830 GDF7Q7Z4P5 450 aa12.71□□□□□ -0.38
CLK3-203ENST00000454830 ZAR1Q86SH2 424 aa12.71□□□□□ -0.38
CLK3-203ENST00000454830 GNPDA2Q8TDQ7 276 aa12.71□□□□□ -0.38
CLK3-203ENST00000454830 PLA2G12AQ9BZM1 189 aa12.71□□□□□ -0.38
CLK3-203ENST00000454830 CHRDQ9H2X0 955 aa12.71□□□□□ -0.38
CLK3-203ENST00000454830 GPR27Q9NS67 375 aa12.71□□□□□ -0.38
CLK3-203ENST00000454830 ERGIC3Q9Y282 383 aa12.71□□□□□ -0.38
CLK3-203ENST00000454830 ARRDC5A6NEK1 342 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 EFCAB9A8MZ26 197 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 J3QRK9 145 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 FOXS1O43638 330 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 GMFGO60234 142 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 SAGP10523 405 aaPredicted RBP12.7□□□□□ -0.38
CLK3-203ENST00000454830 GSTM3P21266 225 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 LIPAP38571 399 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 SLC16A1P53985 500 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 LINC00471Q8N535 108 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 GATSQ8NAP1 163 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 SLC38A2Q96QD8 506 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 OR8D2Q9GZM6 311 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 CHCHD3Q9NX63 227 aaKnown RBP12.7□□□□□ -0.38
CLK3-203ENST00000454830 ACAD8Q9UKU7 415 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 AGAP5A6NIR3 686 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 PRKYO43930 277 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 PCYT1AP49585 367 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 RPS3AP61247 264 aaKnown RBP12.7□□□□□ -0.38
CLK3-203ENST00000454830 RELAQ04206 551 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 COX10Q12887 443 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 GRM7Q14831 915 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 SLC27A4Q6P1M0 643 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 ANKRD13BQ86YJ7 626 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 GAL3ST4Q96RP7 486 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 ARHGDIGQ99819 225 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 NCOR1O75376 2440 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 LILRA5A6NI73 299 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 HPGDP15428 266 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 ARRB1P49407 418 aaPredicted RBP12.7□□□□□ -0.38
CLK3-203ENST00000454830 SYT6Q5T7P8 510 aaPredicted RBP12.7□□□□□ -0.38
CLK3-203ENST00000454830 SLX4IPQ5VYV7 408 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 SLC16A12Q6ZSM3 486 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 CAMKK1Q8N5S9 505 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 DEFB123Q8N688 67 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms