RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 ZNF780BQ9Y6R6 833 aa5.37□□□□□ -1.55
HLA-DPA3-207ENST00000454398 MALRD1Q5VYJ5 2156 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CCDC188H7C350 402 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 EIF3HO15372 352 aaKnown RBP eCLIP5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ZSCAN12O43309 604 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 EMC8O43402 210 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CXCL13O43927 109 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 GPRIN2O60269 458 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 SMIM24O75264 130 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 UTS2O95399 124 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 IGHV4-39P01824 125 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 SBK3P0C264 359 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 NAGAP17050 411 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CHMP24386 653 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 EDNRAP25101 427 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 TIA1P31483 386 aaKnown RBP eCLIP5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 SFTPDP35247 375 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 NCBP2P52298 156 aaKnown RBP eCLIP5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 DSCR4P56555 118 aaPredicted RBP5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 PSG6Q00889 435 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 BTKQ06187 659 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 HSPB3Q12988 150 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 BIKQ13323 160 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 EFR3AQ14156 821 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ACAP2Q15057 778 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 SGCBQ16585 318 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CLEC12BQ2HXU8 276 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 NDUFAF6Q330K2 333 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 GRAMD1BQ3KR37 738 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 GGTA1PQ4G0N0 100 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 BEX5Q5H9J7 111 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 TEX35Q5T0J7 233 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 OR2A2Q6IF42 318 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 HMBOX1Q6NT76 420 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 PRSS57Q6UWY2 283 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 IL17RELQ6ZVW7 336 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 FAM214BQ7L5A3 538 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 MILR1Q7Z6M3 343 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 EXOC3L1Q86VI1 746 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 FAM9CQ8IZT9 166 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 SPATA4Q8NEY3 305 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 OR10D3Q8NH80 312 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 LILRB1Q8NHL6 650 aaPredicted RBP5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 SPATA3Q8NHX4 192 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ZNF675Q8TD23 568 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ZNF483Q8TF39 744 aaPredicted RBP5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 RNF145Q96MT1 663 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 SLC39A3Q9BRY0 314 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 NTMT1Q9BV86 223 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 FAIM2Q9BWQ8 316 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CXorf56Q9H5V9 222 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 DDX18Q9NVP1 670 aaKnown RBP5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 DMGDHQ9UI17 866 aaKnown RBP5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ADAM29Q9UKF5 820 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CFL2Q9Y281 166 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ZNF175Q9Y473 711 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 POLR3HQ9Y535 204 aaPredicted RBP5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 TIMM22Q9Y584 194 aa5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 TNPO3Q9Y5L0 923 aaKnown RBP5.36□□□□□ -1.55
HLA-DPA3-207ENST00000454398 IGHV4-30-2A0A087WSY4 118 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 IGHV3-15A0A0B4J1V0 119 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 NPIPA5A0A0B4J1W7 369 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 FAM187AA6NFU0 413 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 TRIM49D1C9J1S8 452 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 NPIPA7E9PJI5 369 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 STX16-NPEPL1H3BU86 382 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 STX16O14662 325 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 PHF1O43189 567 aaPredicted RBP5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 OIP5O43482 229 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 FADS1O60427 444 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 RAMP1O60894 148 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ABCB7O75027 752 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CDH16O75309 829 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 SOX30O94993 753 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 OTCP00480 354 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CRHP06850 196 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 C8BP07358 591 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 NPIPA8P0DM63 369 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CD8BP10966 210 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ZNF16P17020 682 aaPredicted RBP5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 TBXA2RP21731 343 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 AGTR1P30556 359 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 PAFAH1B1P43034 410 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 MAGEA12P43365 314 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ARFIP1P53367 373 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 FOXA1P55317 472 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CTBP2P56545 445 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 RPS4XP62701 263 aaKnown RBP5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 BSPH1Q075Z2 132 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 FOXF1Q12946 379 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 NAB1Q13506 487 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CD226Q15762 336 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 STK11Q15831 433 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CCNJQ5T5M9 372 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 FIGNL1Q6PIW4 674 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 SEZ6L2Q6UXD5 910 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 NUFIP2Q7Z417 695 aaKnown RBP5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 METTL25Q8N6Q8 603 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CLHC1Q8NHS4 586 aa5.35□□□□□ -1.55
HLA-DPA3-207ENST00000454398 C16orf78Q8WTQ4 265 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms