RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 ZIC3O60481 467 aa13.23□□□□□ -0.29
HSPG2-207ENST00000453796 SNRPB2P08579 225 aaKnown RBP13.23□□□□□ -0.29
HSPG2-207ENST00000453796 COX6B1P14854 86 aa13.23□□□□□ -0.29
HSPG2-207ENST00000453796 CPN1P15169 458 aa13.23□□□□□ -0.29
HSPG2-207ENST00000453796 CEACAM8P31997 349 aaPredicted RBP13.23□□□□□ -0.29
HSPG2-207ENST00000453796 SLC18A1P54219 525 aa13.23□□□□□ -0.29
HSPG2-207ENST00000453796 PSMD4P55036 377 aaKnown RBP13.23□□□□□ -0.29
HSPG2-207ENST00000453796 CLDN8P56748 225 aa13.23□□□□□ -0.29
HSPG2-207ENST00000453796 DUSP5Q16690 384 aa13.23□□□□□ -0.29
HSPG2-207ENST00000453796 CPTPQ5TA50 214 aa13.23□□□□□ -0.29
HSPG2-207ENST00000453796 ZCCHC12Q6PEW1 402 aa13.23□□□□□ -0.29
HSPG2-207ENST00000453796 APOOLQ6UXV4 268 aa13.23□□□□□ -0.29
HSPG2-207ENST00000453796 KIRREL3Q8IZU9 778 aa13.23□□□□□ -0.29
HSPG2-207ENST00000453796 ZNF295-AS1Q8N0V1 137 aa13.23□□□□□ -0.29
HSPG2-207ENST00000453796 NATD1Q8N6N6 113 aa13.23□□□□□ -0.29
HSPG2-207ENST00000453796 ANKRD42Q8N9B4 389 aa13.23□□□□□ -0.29
HSPG2-207ENST00000453796 OR2M3Q8NG83 312 aa13.23□□□□□ -0.29
HSPG2-207ENST00000453796 OR10Q1Q8NGQ4 319 aa13.23□□□□□ -0.29
HSPG2-207ENST00000453796 OR5P2Q8WZ92 322 aa13.23□□□□□ -0.29
HSPG2-207ENST00000453796 PPP1R36Q96LQ0 422 aa13.23□□□□□ -0.29
HSPG2-207ENST00000453796 SPOCK3Q9BQ16 436 aa13.23□□□□□ -0.29
HSPG2-207ENST00000453796 BHLHE41Q9C0J9 482 aaPredicted RBP13.23□□□□□ -0.29
HSPG2-207ENST00000453796 CXorf36Q9H7Y0 433 aa13.23□□□□□ -0.29
HSPG2-207ENST00000453796 ATAD3AQ9NVI7 634 aa13.23□□□□□ -0.29
HSPG2-207ENST00000453796 FAM120CQ9NX05 1096 aaKnown RBP13.23□□□□□ -0.29
HSPG2-207ENST00000453796 MRTO4Q9UKD2 239 aaKnown RBP13.23□□□□□ -0.29
HSPG2-207ENST00000453796 EIF3LQ9Y262 564 aaKnown RBP13.23□□□□□ -0.29
HSPG2-207ENST00000453796 FAM47E-STBD1D6RA91 191 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 SNNO75324 88 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-207ENST00000453796 KCNK2O95069 426 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 KCNH1O95259 989 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 UTS2O95399 124 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 MSX1P28360 303 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 TIMP3P35625 211 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 DIO3P55073 304 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 WNT3P56703 355 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 B3GALT5-AS1P59052 145 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 MAGOHP61326 146 aaKnown RBP13.22□□□□□ -0.29
HSPG2-207ENST00000453796 PRR5P85299 388 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.22□□□□□ -0.29
HSPG2-207ENST00000453796 GRAMD1BQ3KR37 738 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 VPS26BQ4G0F5 336 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 HHATQ5VTY9 493 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 NSUN5P2Q63ZY6 315 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 ZAR1Q86SH2 424 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 ADGRE4PQ86SQ3 457 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 IFNEQ86WN2 208 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 LACC1Q8IV20 430 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 TRIM42Q8IWZ5 723 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 LRRC34Q8IZ02 419 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 NAXEQ8NCW5 288 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 OR14L1PQ8NHC6 308 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 FBXO30Q8TB52 745 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 GPR151Q8TDV0 419 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 SLC9A6Q92581 669 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 RMND5BQ96G75 393 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-207ENST00000453796 C16orf58Q96GQ5 468 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 MEAF6Q9HAF1 191 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 KCNJ16Q9NPI9 418 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 ZCCHC3Q9NUD5 404 aaKnown RBP13.22□□□□□ -0.29
HSPG2-207ENST00000453796 PNPOQ9NVS9 261 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 GIN1Q9NXP7 522 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 TAS2R10Q9NYW0 307 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 PPP4R1LQ9P1A2 415 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 CAMK2AQ9UQM7 478 aa13.22□□□□□ -0.29
HSPG2-207ENST00000453796 CSMD1Q96PZ7 3565 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 IGLV3-32A0A0A0MS00 114 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 MBD3L4A6NDZ8 208 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-207ENST00000453796 MBD3L3A6NE82 208 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-207ENST00000453796 MBD3L5A6NJ08 208 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-207ENST00000453796 CD8B2A6NJW9 211 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 ANKRD28O15084 1053 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 C6orf47O95873 294 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 HMGN2P05204 90 aaKnown RBP13.21□□□□□ -0.29
HSPG2-207ENST00000453796 NGFRP08138 427 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 CHMP24386 653 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 DPP4P27487 766 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 PRIM2P49643 509 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 LHX2P50458 406 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 DSCR4P56555 118 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-207ENST00000453796 CDC73Q6P1J9 531 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 POMZP3Q6PJE2 187 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 SZRD1Q7Z422 152 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 MARCH3Q86UD3 253 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 TNIP2Q8NFZ5 429 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 MBD3L2Q8NHZ7 208 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-207ENST00000453796 ZPLD1Q8TCW7 415 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 DTNBP1Q96EV8 351 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 STACQ99469 402 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 PRPF18Q99633 342 aaKnown RBP13.21□□□□□ -0.29
HSPG2-207ENST00000453796 PAIP2Q9BPZ3 127 aaKnown RBP13.21□□□□□ -0.29
HSPG2-207ENST00000453796 YIPF4Q9BSR8 244 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 G6PC3Q9BUM1 346 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 DUSP26Q9BV47 211 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 NUF2Q9BZD4 464 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 DSN1Q9H410 356 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 RUBCNLQ9H714 662 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 DUSP22Q9NRW4 184 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 GPATCH2Q9NW75 528 aa13.21□□□□□ -0.29
HSPG2-207ENST00000453796 FBXO34Q9NWN3 711 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms