RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 GOLGA7Q7Z5G4 137 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 UBE3DQ7Z6J8 389 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SNX29P2Q8IUI4 249 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 GLB1L2Q8IW92 636 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 EXD3Q8N9H8 876 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 BPIFCQ8NFQ6 507 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SUN3Q8TAQ9 357 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SCGB1C1Q8TD33 95 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 LINGO1Q96FE5 620 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SENP5Q96HI0 755 aaPredicted RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 FAM46AQ96IP4 442 aaKnown RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 ZDHHC15Q96MV8 337 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 LINC00052Q96N35 136 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ZNF582Q96NG8 517 aaPredicted RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 ZNF599Q96NL3 588 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 TSSK3Q96PN8 268 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 CRAMP1Q96RY5 1269 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SYT17Q9BSW7 474 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ALOXE3Q9BYJ1 711 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 MIR1-1HGQ9H1L0 117 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 PLK3Q9H4B4 646 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 TUBG2Q9NRH3 451 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ASIC5Q9NY37 505 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 OR6C2Q9NZP2 312 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SLC2A6Q9UGQ3 507 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ZNF230Q9UIE0 474 aaPredicted RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 FBXL2Q9UKC9 423 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 TP53TG5Q9Y2B4 290 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 HEMK1Q9Y5R4 338 aaPredicted RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 ARAP2Q8WZ64 1704 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 A0A1B0GWJ7 208 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 MAN2B1O00754 1011 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 ADAMTS3O15072 1205 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 SELENOFO60613 162 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 CLN5O75503 358 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 SCO1O75880 301 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 TOXO94900 526 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 MT-CO2P00403 227 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 ALDOAP04075 364 aaKnown RBP2.09□□□□□ -2.08
USP53-202ENST00000450251 THP07101 528 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 MMP7P09237 267 aaPredicted RBP2.09□□□□□ -2.08
USP53-202ENST00000450251 GABRB1P18505 474 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 AGXTP21549 392 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 GIFP27352 417 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 GABRR2P28476 465 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 CCND3P30281 292 aaPredicted RBP2.09□□□□□ -2.08
USP53-202ENST00000450251 RFX3P48380 749 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 ACOT2P49753 483 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 MAP2K6P52564 334 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 PTTG1IPP53801 180 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 DVL1P1P54792 670 aaPredicted RBP2.09□□□□□ -2.08
USP53-202ENST00000450251 GDF10P55107 478 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 ATP5IP56385 69 aaPredicted RBP2.09□□□□□ -2.08
USP53-202ENST00000450251 SCAND1P57086 179 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 WDR5P61964 334 aaKnown RBP2.09□□□□□ -2.08
USP53-202ENST00000450251 SUMO1P63165 101 aaKnown RBP2.09□□□□□ -2.08
USP53-202ENST00000450251 CACNG1Q06432 222 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 ZNF616Q08AN1 781 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 ST3GAL3Q11203 375 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 GPR176Q14439 515 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 TCEA2Q15560 299 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 NKPD1Q17RQ9 610 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 SLC25A52Q3SY17 297 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 SCGB2B2Q4G0G5 96 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 NKAIN1Q4KMZ8 207 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 SEZ6Q53EL9 994 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 XKR4Q5GH76 650 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 CRB2Q5IJ48 1285 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 KDM4DQ6B0I6 523 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 RBMS3Q6XE24 437 aaKnown RBP2.09□□□□□ -2.08
USP53-202ENST00000450251 ZNF620Q6ZNG0 422 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 RNF180Q86T96 592 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 KLBQ86Z14 1044 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 TCTEX1D1Q8N7M0 179 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 ZNF383Q8NA42 475 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 OR10H4Q8NGA5 316 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 OR4F15Q8NGB8 312 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 OR5M8Q8NGP6 311 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 OR6K3Q8NGY3 331 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 OR51F2Q8NH61 342 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 FIBINQ8TAL6 211 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 RNF128Q8TEB7 428 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 ATOH1Q92858 354 aaPredicted RBP2.09□□□□□ -2.08
USP53-202ENST00000450251 MR1Q95460 341 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 SLAMF9Q96A28 289 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 PNPLA2Q96AD5 504 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 ECHDC3Q96DC8 303 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 FOXN4Q96NZ1 517 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 TSGA13Q96PP4 275 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 FCRL5Q96RD9 977 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 MMP19Q99542 508 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 VAMP8Q9BV40 100 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 DUSP26Q9BV47 211 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 RAB11FIP5Q9BXF6 653 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 COA1Q9GZY4 146 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 ZNF395Q9H8N7 513 aaPredicted RBP2.09□□□□□ -2.08
USP53-202ENST00000450251 FN3KRPQ9HA64 309 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 AGO4Q9HCK5 861 aaKnown RBP2.09□□□□□ -2.08
USP53-202ENST00000450251 GSN-AS1Q9NRJ2 163 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 IGSF5Q9NSI5 407 aa2.09□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms