RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 TPD52L3Q96J77 140 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 RNF145Q96MT1 663 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 ADOQ96SZ5 270 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 TRIM45Q9H8W5 580 aaPredicted RBP18.01■□□□□ 0.47
SGCE-207ENST00000447873 OLAHQ9NV23 265 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 DKK4Q9UBT3 224 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 NPFFR2Q9Y5X5 522 aa18.01■□□□□ 0.47
SGCE-207ENST00000447873 DOCK10Q96BY6 2186 aa18■□□□□ 0.47
SGCE-207ENST00000447873 TCRBV3S1A0A5B6 114 aa18■□□□□ 0.47
SGCE-207ENST00000447873 PRKD3O94806 890 aa18■□□□□ 0.47
SGCE-207ENST00000447873 MFN2O95140 757 aa18■□□□□ 0.47
SGCE-207ENST00000447873 C8BP07358 591 aa18■□□□□ 0.47
SGCE-207ENST00000447873 PSMA4P25789 261 aaKnown RBP18■□□□□ 0.47
SGCE-207ENST00000447873 SELENOWP63302 87 aa18■□□□□ 0.47
SGCE-207ENST00000447873 FCRLBQ6BAA4 426 aa18■□□□□ 0.47
SGCE-207ENST00000447873 JMJD6Q6NYC1 403 aaPredicted RBP18■□□□□ 0.47
SGCE-207ENST00000447873 EIF3MQ7L2H7 374 aaKnown RBP18■□□□□ 0.47
SGCE-207ENST00000447873 TMEM102Q8N9M5 508 aaPredicted RBP18■□□□□ 0.47
SGCE-207ENST00000447873 SMYD1Q8NB12 490 aa18■□□□□ 0.47
SGCE-207ENST00000447873 OR10Q1Q8NGQ4 319 aa18■□□□□ 0.47
SGCE-207ENST00000447873 CDCP1Q9H5V8 836 aa18■□□□□ 0.47
SGCE-207ENST00000447873 ANGPTL2Q9UKU9 493 aa18■□□□□ 0.47
SGCE-207ENST00000447873 NPIPA5A0A0B4J1W7 369 aa18■□□□□ 0.47
SGCE-207ENST00000447873 DHRS12A0PJE2 317 aa18■□□□□ 0.47
SGCE-207ENST00000447873 AGAP5A6NIR3 686 aa18■□□□□ 0.47
SGCE-207ENST00000447873 ARGFXA6NJG6 315 aa18■□□□□ 0.47
SGCE-207ENST00000447873 NPIPA7E9PJI5 369 aa18■□□□□ 0.47
SGCE-207ENST00000447873 HS6ST1O60243 411 aa18■□□□□ 0.47
SGCE-207ENST00000447873 ITGA10O75578 1167 aa18■□□□□ 0.47
SGCE-207ENST00000447873 NPIPA8P0DM63 369 aa18■□□□□ 0.47
SGCE-207ENST00000447873 UMPSP11172 480 aa18■□□□□ 0.47
SGCE-207ENST00000447873 IL7RP16871 459 aa18■□□□□ 0.47
SGCE-207ENST00000447873 ITGA3P26006 1051 aa18■□□□□ 0.47
SGCE-207ENST00000447873 PNLIPRP2P54317 469 aa18■□□□□ 0.47
SGCE-207ENST00000447873 CDC20Q12834 499 aa18■□□□□ 0.47
SGCE-207ENST00000447873 ZNF311Q5JNZ3 666 aa18■□□□□ 0.47
SGCE-207ENST00000447873 AP1ARQ63HQ0 302 aa18■□□□□ 0.47
SGCE-207ENST00000447873 ENPP6Q6UWR7 440 aa18■□□□□ 0.47
SGCE-207ENST00000447873 SLC15A4Q8N697 577 aa18■□□□□ 0.47
SGCE-207ENST00000447873 GOLM1Q8NBJ4 401 aa18■□□□□ 0.47
SGCE-207ENST00000447873 OR52P1PQ8NH57 321 aa18■□□□□ 0.47
SGCE-207ENST00000447873 BRIX1Q8TDN6 353 aaKnown RBP18■□□□□ 0.47
SGCE-207ENST00000447873 RASL10BQ96S79 203 aa18■□□□□ 0.47
SGCE-207ENST00000447873 DOHHQ9BU89 302 aa18■□□□□ 0.47
SGCE-207ENST00000447873 UGT2B28Q9BY64 529 aa18■□□□□ 0.47
SGCE-207ENST00000447873 AURKCQ9UQB9 309 aa18■□□□□ 0.47
SGCE-207ENST00000447873 POLHQ9Y253 713 aa18■□□□□ 0.47
SGCE-207ENST00000447873 YARS2Q9Y2Z4 477 aaKnown RBP18■□□□□ 0.47
SGCE-207ENST00000447873 IFT52Q9Y366 437 aa18■□□□□ 0.47
SGCE-207ENST00000447873 PCDHGA10Q9Y5H3 936 aa18■□□□□ 0.47
SGCE-207ENST00000447873 CACNA1AO00555 2505 aa17.99■□□□□ 0.47
SGCE-207ENST00000447873 EXPH5Q8NEV8 1989 aa17.99■□□□□ 0.47
SGCE-207ENST00000447873 TSPAN2O60636 221 aa17.99■□□□□ 0.47
SGCE-207ENST00000447873 ZNF354AO60765 605 aaPredicted RBP17.99■□□□□ 0.47
SGCE-207ENST00000447873 PPM1BO75688 479 aa17.99■□□□□ 0.47
SGCE-207ENST00000447873 UGT2B17O75795 530 aa17.99■□□□□ 0.47
SGCE-207ENST00000447873 NADKO95544 446 aaPredicted RBP17.99■□□□□ 0.47
SGCE-207ENST00000447873 GPIP06744 558 aa17.99■□□□□ 0.47
SGCE-207ENST00000447873 DBIP07108 87 aaKnown RBP17.99■□□□□ 0.47
SGCE-207ENST00000447873 PABPC4LP0CB38 370 aaKnown RBP17.99■□□□□ 0.47
SGCE-207ENST00000447873 TMED10P49755 219 aaKnown RBP17.99■□□□□ 0.47
SGCE-207ENST00000447873 H3F3CQ6NXT2 135 aa17.99■□□□□ 0.47
SGCE-207ENST00000447873 FKBP9P1Q75LS8 142 aa17.99■□□□□ 0.47
SGCE-207ENST00000447873 SIRT6Q8N6T7 355 aa17.99■□□□□ 0.47
SGCE-207ENST00000447873 FAM86B1Q8N7N1 296 aa17.99■□□□□ 0.47
SGCE-207ENST00000447873 CANT1Q8WVQ1 401 aa17.99■□□□□ 0.47
SGCE-207ENST00000447873 PYURFQ96I23 114 aa17.99■□□□□ 0.47
SGCE-207ENST00000447873 HSH2DQ96JZ2 352 aa17.99■□□□□ 0.47
SGCE-207ENST00000447873 SEPHS2Q99611 448 aa17.99■□□□□ 0.47
SGCE-207ENST00000447873 HOXD1Q9GZZ0 328 aa17.99■□□□□ 0.47
SGCE-207ENST00000447873 ZBTB20Q9HC78 741 aaPredicted RBP17.99■□□□□ 0.47
SGCE-207ENST00000447873 ANAPC2Q9UJX6 822 aa17.99■□□□□ 0.47
SGCE-207ENST00000447873 BAG5Q9UL15 447 aa17.99■□□□□ 0.47
SGCE-207ENST00000447873 ZNF232Q9UNY5 417 aa17.99■□□□□ 0.47
SGCE-207ENST00000447873 APC2O95996 2303 aa17.98■□□□□ 0.47
SGCE-207ENST00000447873 NINQ8N4C6 2090 aa17.98■□□□□ 0.47
SGCE-207ENST00000447873 OR6C70A6NIJ9 312 aa17.98■□□□□ 0.47
SGCE-207ENST00000447873 ABCB7O75027 752 aa17.98■□□□□ 0.47
SGCE-207ENST00000447873 NAGAP17050 411 aa17.98■□□□□ 0.47
SGCE-207ENST00000447873 LCN1P31025 176 aa17.98■□□□□ 0.47
SGCE-207ENST00000447873 DCTP40126 519 aa17.98■□□□□ 0.47
SGCE-207ENST00000447873 ATP12AP54707 1039 aa17.98■□□□□ 0.47
SGCE-207ENST00000447873 MLF1P58340 268 aa17.98■□□□□ 0.47
SGCE-207ENST00000447873 LARS2Q15031 903 aaKnown RBP17.98■□□□□ 0.47
SGCE-207ENST00000447873 DUSP7Q16829 419 aa17.98■□□□□ 0.47
SGCE-207ENST00000447873 FAM98BQ52LJ0 330 aaKnown RBP17.98■□□□□ 0.47
SGCE-207ENST00000447873 IRAK1BP1Q5VVH5 260 aa17.98■□□□□ 0.47
SGCE-207ENST00000447873 VTCN1Q7Z7D3 282 aa17.98■□□□□ 0.47
SGCE-207ENST00000447873 VRK2Q86Y07 508 aa17.98■□□□□ 0.47
SGCE-207ENST00000447873 ADGRG5Q8IZF4 528 aa17.98■□□□□ 0.47
SGCE-207ENST00000447873 ARMC10Q8N2F6 343 aa17.98■□□□□ 0.47
SGCE-207ENST00000447873 PYDC1Q8WXC3 89 aa17.98■□□□□ 0.47
SGCE-207ENST00000447873 GATA6Q92908 595 aa17.98■□□□□ 0.47
SGCE-207ENST00000447873 LHPPQ9H008 270 aa17.98■□□□□ 0.47
SGCE-207ENST00000447873 UBQLN4Q9NRR5 601 aa17.98■□□□□ 0.47
SGCE-207ENST00000447873 KCNE5Q9UJ90 142 aa17.98■□□□□ 0.47
SGCE-207ENST00000447873 ACACAQ13085 2346 aa17.97■□□□□ 0.47
SGCE-207ENST00000447873 CELSR3Q9NYQ7 3312 aa17.97■□□□□ 0.47
SGCE-207ENST00000447873 RRP8O43159 456 aaKnown RBP17.97■□□□□ 0.47
SGCE-207ENST00000447873 EFSO43281 561 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms