RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 DUSP19Q8WTR2 217 aa13.41□□□□□ -0.26
USE1-202ENST00000445667 OR5P2Q8WZ92 322 aa13.41□□□□□ -0.26
USE1-202ENST00000445667 HOXB13Q92826 284 aaPredicted RBP13.41□□□□□ -0.26
USE1-202ENST00000445667 MS4A4EQ96PG1 132 aa13.41□□□□□ -0.26
USE1-202ENST00000445667 PRPF18Q99633 342 aaKnown RBP13.41□□□□□ -0.26
USE1-202ENST00000445667 RUBCNLQ9H714 662 aa13.41□□□□□ -0.26
USE1-202ENST00000445667 ZCCHC3Q9NUD5 404 aaKnown RBP13.41□□□□□ -0.26
USE1-202ENST00000445667 ATAD3AQ9NVI7 634 aa13.41□□□□□ -0.26
USE1-202ENST00000445667 FBXO34Q9NWN3 711 aa13.41□□□□□ -0.26
USE1-202ENST00000445667 NOP53Q9NZM5 478 aaKnown RBP13.41□□□□□ -0.26
USE1-202ENST00000445667 HAO1Q9UJM8 370 aa13.41□□□□□ -0.26
USE1-202ENST00000445667 DKKL1Q9UK85 242 aa13.41□□□□□ -0.26
USE1-202ENST00000445667 RPH3AQ9Y2J0 694 aaPredicted RBP13.41□□□□□ -0.26
USE1-202ENST00000445667 MAST4O15021 2626 aa13.41□□□□□ -0.26
USE1-202ENST00000445667 ZIC3O60481 467 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 SNUPNO95149 360 aaKnown RBP13.4□□□□□ -0.26
USE1-202ENST00000445667 ACTL6AO96019 429 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 HMGN2P05204 90 aaKnown RBP13.4□□□□□ -0.26
USE1-202ENST00000445667 ALOX5P09917 674 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 DPP4P27487 766 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 CCT3P49368 545 aaKnown RBP13.4□□□□□ -0.26
USE1-202ENST00000445667 CLDN8P56748 225 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 PRR5P85299 388 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 SRYQ05066 204 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 TFF3Q07654 80 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 SMU1Q2TAY7 513 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 GRAMD1BQ3KR37 738 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 RIPPLY2Q5TAB7 128 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 FIGNL1Q6PIW4 674 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 APOOLQ6UXV4 268 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 ZAR1Q86SH2 424 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 IFNEQ86WN2 208 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 TNIP2Q8NFZ5 429 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 OR2M3Q8NG83 312 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 JADE3Q92613 823 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 TLCD1Q96CP7 247 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 CHMP6Q96FZ7 201 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 TRIB1Q96RU8 372 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 DUSP26Q9BV47 211 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 BHLHE41Q9C0J9 482 aaPredicted RBP13.4□□□□□ -0.26
USE1-202ENST00000445667 CXorf36Q9H7Y0 433 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 FAM120CQ9NX05 1096 aaKnown RBP13.4□□□□□ -0.26
USE1-202ENST00000445667 ASIC5Q9NY37 505 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 ABCG2Q9UNQ0 655 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 NAV2Q8IVL1 2488 aa13.4□□□□□ -0.26
USE1-202ENST00000445667 CFLARO15519 480 aa13.39□□□□□ -0.27
USE1-202ENST00000445667 GMFGO60234 142 aa13.39□□□□□ -0.27
USE1-202ENST00000445667 KCNK2O95069 426 aa13.39□□□□□ -0.27
USE1-202ENST00000445667 GCKP35557 465 aa13.39□□□□□ -0.27
USE1-202ENST00000445667 PRIM2P49643 509 aa13.39□□□□□ -0.27
USE1-202ENST00000445667 CLK3P49761 638 aaKnown RBP13.39□□□□□ -0.27
USE1-202ENST00000445667 GFRA1P56159 465 aa13.39□□□□□ -0.27
USE1-202ENST00000445667 DSCR4P56555 118 aaPredicted RBP13.39□□□□□ -0.27
USE1-202ENST00000445667 TP53BP2Q13625 1128 aa13.39□□□□□ -0.27
USE1-202ENST00000445667 CASP8Q14790 479 aa13.39□□□□□ -0.27
USE1-202ENST00000445667 LASP1Q14847 261 aaKnown RBP13.39□□□□□ -0.27
USE1-202ENST00000445667 LSM12Q3MHD2 195 aaKnown RBP13.39□□□□□ -0.27
USE1-202ENST00000445667 EXOSC6Q5RKV6 272 aaKnown RBP13.39□□□□□ -0.27
USE1-202ENST00000445667 CCNJQ5T5M9 372 aa13.39□□□□□ -0.27
USE1-202ENST00000445667 OR4F3Q6IEY1 312 aa13.39□□□□□ -0.27
USE1-202ENST00000445667 ZCCHC12Q6PEW1 402 aa13.39□□□□□ -0.27
USE1-202ENST00000445667 MEX3BQ6ZN04 569 aaKnown RBP13.39□□□□□ -0.27
USE1-202ENST00000445667 ZNF295-AS1Q8N0V1 137 aa13.39□□□□□ -0.27
USE1-202ENST00000445667 NATD1Q8N6N6 113 aa13.39□□□□□ -0.27
USE1-202ENST00000445667 FADS6Q8N9I5 356 aa13.39□□□□□ -0.27
USE1-202ENST00000445667 NAXEQ8NCW5 288 aa13.39□□□□□ -0.27
USE1-202ENST00000445667 OR4C3Q8NH37 302 aa13.39□□□□□ -0.27
USE1-202ENST00000445667 PSMA8Q8TAA3 256 aa13.39□□□□□ -0.27
USE1-202ENST00000445667 FAM110BQ8TC76 370 aa13.39□□□□□ -0.27
USE1-202ENST00000445667 SFXN2Q96NB2 322 aa13.39□□□□□ -0.27
USE1-202ENST00000445667 TBL1XR1Q9BZK7 514 aa13.39□□□□□ -0.27
USE1-202ENST00000445667 DPY30Q9C005 99 aa13.39□□□□□ -0.27
USE1-202ENST00000445667 ENKD1Q9H0I2 346 aa13.39□□□□□ -0.27
USE1-202ENST00000445667 NPDC1Q9NQX5 325 aaPredicted RBP13.39□□□□□ -0.27
USE1-202ENST00000445667 SDHAF3Q9NRP4 125 aa13.39□□□□□ -0.27
USE1-202ENST00000445667 MRPS18CQ9Y3D5 142 aaKnown RBP13.39□□□□□ -0.27
USE1-202ENST00000445667 CENPEQ02224 2701 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 FAM47E-STBD1D6RA91 191 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 ANGPTL1O95841 491 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 KITP10721 976 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 CPN1P15169 458 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 LBPP18428 481 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 CEACAM8P31997 349 aaPredicted RBP13.38□□□□□ -0.27
USE1-202ENST00000445667 LHX2P50458 406 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 SLC18A1P54219 525 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 C21orf58P58505 322 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 HBA1P69905 142 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 SPDYE7PQ495Y7 208 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 NSUN5P2Q63ZY6 315 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 ENPP6Q6UWR7 440 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 PLXDC2Q6UX71 529 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 CAMKMTQ7Z624 323 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 LACC1Q8IV20 430 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 CLECL1Q8IZS7 167 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 COX18Q8N8Q8 333 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 ACBD4Q8NC06 268 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 OR5AK3PQ8NH89 298 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 CDS1Q92903 461 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 SPOCK3Q9BQ16 436 aa13.38□□□□□ -0.27
USE1-202ENST00000445667 TUBA1CQ9BQE3 449 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms