RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 RNF148Q8N7C7 305 aa15.84■□□□□ 0.13
LIME1-202ENST00000444951 ANKFN1Q8N957 763 aa15.84■□□□□ 0.13
LIME1-202ENST00000444951 ADOQ96SZ5 270 aa15.84■□□□□ 0.13
LIME1-202ENST00000444951 CDRT15Q96T59 188 aa15.84■□□□□ 0.13
LIME1-202ENST00000444951 SMAD5Q99717 465 aaKnown RBP15.84■□□□□ 0.13
LIME1-202ENST00000444951 SPAG4Q9NPE6 437 aa15.84■□□□□ 0.13
LIME1-202ENST00000444951 PRAMEF27A3QJZ7 478 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 TMEM247A6NEH6 219 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 C5orf58C9J3I9 102 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 TO15178 435 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 GYG2O15488 501 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 ASNA1O43681 348 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 TNFRSF21O75509 655 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 AGFG2O95081 481 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 WDPCPO95876 746 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 AGR2O95994 175 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 ATP6V1C1P21283 382 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 FBXW4P57775 412 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 HPCAP84074 193 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 LIPEQ05469 1076 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 MFAP5Q13361 173 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 OPN5Q6U736 354 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 ZAR1Q86SH2 424 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 ARMC10Q8N2F6 343 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 NFKBIDQ8NI38 313 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 UTP23Q9BRU9 249 aaKnown RBP15.83■□□□□ 0.12
LIME1-202ENST00000444951 HPF1Q9NWY4 346 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 TAS2R1Q9NYW7 299 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 P2RX2Q9UBL9 471 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 MRTO4Q9UKD2 239 aaKnown RBP15.83■□□□□ 0.12
LIME1-202ENST00000444951 PCDHGB7Q9Y5F8 929 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 UNC79Q9P2D8 2635 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 DOCK10Q96BY6 2186 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 NOTCH2Q04721 2471 aa15.83■□□□□ 0.12
LIME1-202ENST00000444951 NPIPA5A0A0B4J1W7 369 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 NPIPA7E9PJI5 369 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 DPM1O60762 260 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 PPM1BO75688 479 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 ATP5HO75947 161 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 FBXO45P0C2W1 286 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 NPIPA8P0DM63 369 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 CD96P40200 585 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 MAGEA8P43361 318 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 RNF144AP50876 292 aaPredicted RBP15.82■□□□□ 0.12
LIME1-202ENST00000444951 ARG2P78540 354 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 TXNL4AP83876 142 aaKnown RBP15.82■□□□□ 0.12
LIME1-202ENST00000444951 FUT5Q11128 374 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 TUBA3CQ13748 450 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 GPR68Q15743 365 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 ARHGAP11BQ3KRB8 267 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 RPS26P11Q5JNZ5 115 aaPredicted RBP15.82■□□□□ 0.12
LIME1-202ENST00000444951 TUBA3EQ6PEY2 450 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 LYPD8Q6UX82 237 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 BNC2Q6ZN30 1099 aaPredicted RBP15.82■□□□□ 0.12
LIME1-202ENST00000444951 HMGN2P46Q86SG4 172 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 ZZZ3Q8IYH5 903 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 CYP4Z2PQ8N1L4 340 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 SLC15A4Q8N697 577 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 SLC38A5Q8WUX1 472 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 SLC7A6OSQ96CW6 309 aaPredicted RBP15.82■□□□□ 0.12
LIME1-202ENST00000444951 SPACA9Q96E40 222 aaPredicted RBP15.82■□□□□ 0.12
LIME1-202ENST00000444951 COL21A1Q96P44 957 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 SDF2Q99470 211 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 MKLN1Q9UL63 735 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 GMEB1Q9Y692 573 aa15.82■□□□□ 0.12
LIME1-202ENST00000444951 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.82■□□□□ 0.12
LIME1-202ENST00000444951 FCMRO60667 390 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 UGT2B11O75310 529 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 SOX30O94993 753 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 H6PDO95479 791 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 IL33O95760 270 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 CHRM4P08173 479 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 TFPTP0C1Z6 253 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 CYP4B1P13584 511 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 TCN1P20061 433 aaPredicted RBP15.81■□□□□ 0.12
LIME1-202ENST00000444951 AQP1P29972 269 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 CYB561P49447 251 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 TMED10P49755 219 aaKnown RBP15.81■□□□□ 0.12
LIME1-202ENST00000444951 GSK3BP49841 420 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 HLCSP50747 726 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 PSMD4P55036 377 aaKnown RBP15.81■□□□□ 0.12
LIME1-202ENST00000444951 CDK6Q00534 326 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 SCARB2Q14108 478 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 ADRM1Q16186 407 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 EIF2S3LQ2VIR3 472 aaKnown RBP15.81■□□□□ 0.12
LIME1-202ENST00000444951 PLEKHN1Q494U1 663 aaPredicted RBP15.81■□□□□ 0.12
LIME1-202ENST00000444951 HEPHL1Q6MZM0 1159 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 PTOV1Q86YD1 416 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 FAM156AQ8NDB6 213 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 CHDHQ8NE62 594 aaPredicted RBP15.81■□□□□ 0.12
LIME1-202ENST00000444951 OR2T12Q8NG77 320 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 OR10G3Q8NGC4 313 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 DIO2Q92813 273 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 PNPLA2Q96AD5 504 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 TMEM19Q96HH6 336 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 ZNF583Q96ND8 569 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 KCTD14Q9BQ13 255 aaPredicted RBP15.81■□□□□ 0.12
LIME1-202ENST00000444951 BTBD10Q9BSF8 475 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 G6PC3Q9BUM1 346 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.81■□□□□ 0.125e-9■■■■□ 24.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms