RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 GIN1Q9NXP7 522 aa17.11■□□□□ 0.33
ATPAF2-201ENST00000444058 PPP4R1LQ9P1A2 415 aa17.11■□□□□ 0.33
ATPAF2-201ENST00000444058 ZNF629Q9UEG4 869 aaPredicted RBP17.11■□□□□ 0.33
ATPAF2-201ENST00000444058 CAMK2AQ9UQM7 478 aa17.11■□□□□ 0.33
ATPAF2-201ENST00000444058 APCP25054 2843 aa17.11■□□□□ 0.33
ATPAF2-201ENST00000444058 A0A1W2PRB8 838 aa17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 MBD3L4A6NDZ8 208 aaPredicted RBP17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 MBD3L3A6NE82 208 aaPredicted RBP17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 MBD3L5A6NJ08 208 aaPredicted RBP17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 ZIC3O60481 467 aa17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 SOX30O94993 753 aa17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 IL2RAP01589 272 aa17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 NGFRP08138 427 aa17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 LAMP1P11279 417 aa17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 DPP4P27487 766 aa17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 SLC1A6P48664 564 aa17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 SLC18A1P54219 525 aa17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 RCAN2Q14206 197 aa17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 GANABQ14697 944 aaKnown RBP17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 DCST1Q5T197 706 aa17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 OR5M10Q6IEU7 315 aa17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 CAMKMTQ7Z624 323 aa17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 LIX1LQ8IVB5 337 aa17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 TRIM42Q8IWZ5 723 aa17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 OR7A2PQ8NGA2 310 aa17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 MBD3L2Q8NHZ7 208 aaPredicted RBP17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 FAM110BQ8TC76 370 aa17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 OR5P2Q8WZ92 322 aa17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 FAM120BQ96EK7 910 aaKnown RBP17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 UCN2Q96RP3 112 aa17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 C1orf50Q9BV19 199 aa17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 BHLHE41Q9C0J9 482 aaPredicted RBP17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 C20orf27Q9GZN8 174 aa17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 KCNK9Q9NPC2 374 aa17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 SIRT3Q9NTG7 399 aaPredicted RBP17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 NOP53Q9NZM5 478 aaKnown RBP17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 DKKL1Q9UK85 242 aa17.1■□□□□ 0.33
ATPAF2-201ENST00000444058 MYO9AB2RTY4 2548 aa17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 IGLV3-32A0A0A0MS00 114 aa17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 B4DXG7 233 aa17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 LINC01387J3KSC0 135 aa17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 DVL2O14641 736 aa17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 PEX19P40855 299 aa17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 PRIM2P49643 509 aa17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 PRKAG1P54619 331 aa17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 DIO3P55073 304 aa17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 CLDN8P56748 225 aa17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 BCL2A1Q16548 175 aa17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 LSM12Q3MHD2 195 aaKnown RBP17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 ADGRE4PQ86SQ3 457 aa17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 DMRTC2Q8IXT2 367 aaPredicted RBP17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 SLC16A11Q8NCK7 471 aa17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 TNIP2Q8NFZ5 429 aa17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 OR4K17Q8NGC6 315 aa17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 PIK3R3Q92569 461 aa17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 RMND5BQ96G75 393 aaPredicted RBP17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 STACQ99469 402 aa17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 SORT1Q99523 831 aa17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 PTGES2Q9H7Z7 377 aa17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 ZNF395Q9H8N7 513 aaPredicted RBP17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 NEUROD4Q9HD90 331 aa17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 DUSP22Q9NRW4 184 aa17.09■□□□□ 0.33
ATPAF2-201ENST00000444058 LRBAP50851 2863 aa17.08■□□□□ 0.33
ATPAF2-201ENST00000444058 GXYLT2A0PJZ3 443 aa17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 SCO2O43819 266 aa17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 UTS2O95399 124 aa17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 IGKV1D-16P01601 117 aa17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 ALOX5P09917 674 aa17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 G6PDP11413 515 aa17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 ZNF708P17019 499 aa17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 C17orf67Q0P5P2 114 aa17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 STX3Q13277 289 aa17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 GLYR1Q49A26 553 aaPredicted RBP17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 SZRD1Q7Z422 152 aa17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 KRTCAP2Q8N6L1 136 aa17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 NAXEQ8NCW5 288 aa17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 OR2M3Q8NG83 312 aa17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 GOT1L1Q8NHS2 421 aaPredicted RBP17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 SLC9A6Q92581 669 aa17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 MOAP1Q96BY2 351 aa17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 SFXN2Q96NB2 322 aa17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 ZFP3Q96NJ6 502 aa17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 TRIB1Q96RU8 372 aa17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 TBL1XR1Q9BZK7 514 aa17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 AKTIPQ9H8T0 292 aa17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 ZCCHC3Q9NUD5 404 aaKnown RBP17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 FLRT3Q9NZU0 649 aa17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 HCFC1P51610 2035 aa17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 ARHGAP21Q5T5U3 1957 aa17.08■□□□□ 0.32
ATPAF2-201ENST00000444058 ALG1L2C9J202 215 aa17.07■□□□□ 0.32
ATPAF2-201ENST00000444058 SYT5O00445 386 aa17.07■□□□□ 0.32
ATPAF2-201ENST00000444058 KCNK2O95069 426 aa17.07■□□□□ 0.32
ATPAF2-201ENST00000444058 IL18BPO95998 194 aa17.07■□□□□ 0.32
ATPAF2-201ENST00000444058 HMGN2P05204 90 aaKnown RBP17.07■□□□□ 0.32
ATPAF2-201ENST00000444058 ACP2P11117 423 aa17.07■□□□□ 0.32
ATPAF2-201ENST00000444058 TBXA2RP21731 343 aa17.07■□□□□ 0.32
ATPAF2-201ENST00000444058 BGNP21810 368 aa17.07■□□□□ 0.32
ATPAF2-201ENST00000444058 RFX3P48380 749 aa17.07■□□□□ 0.32
ATPAF2-201ENST00000444058 CCT3P49368 545 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms