RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 ZNF701Q9NV72 531 aaPredicted RBP5.31□□□□□ -1.56
PTPRC-209ENST00000442510 DNAJC5BQ9UF47 199 aa5.31□□□□□ -1.56
PTPRC-209ENST00000442510 EXO1Q9UQ84 846 aaKnown RBP5.31□□□□□ -1.56
PTPRC-209ENST00000442510 TOPBP1Q92547 1522 aa5.31□□□□□ -1.56
PTPRC-209ENST00000442510 SLC15A5A6NIM6 579 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 GSG1L2A8MUP6 293 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 UBE2Q2LH0YL09 131 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 SLC33A1O00400 549 aaPredicted RBP5.3□□□□□ -1.56
PTPRC-209ENST00000442510 FABP3P05413 133 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 RAB5AP20339 215 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 FBLP22087 321 aaKnown RBP5.3□□□□□ -1.56
PTPRC-209ENST00000442510 GABRB3P28472 473 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 AQP2P41181 271 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 MARCKSL1P49006 195 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 POLR2HP52434 150 aaKnown RBP5.3□□□□□ -1.56
PTPRC-209ENST00000442510 SPIBQ01892 262 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 CDK5R2Q13319 367 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 CNN3Q15417 329 aaKnown RBP5.3□□□□□ -1.56
PTPRC-209ENST00000442510 RBMS2Q15434 407 aaKnown RBP5.3□□□□□ -1.56
PTPRC-209ENST00000442510 NSUN5P2Q63ZY6 315 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 NADSYN1Q6IA69 706 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 DOK6Q6PKX4 331 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 OR2AE1Q8NHA4 323 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 GRAPLQ8TC17 118 aaPredicted RBP5.3□□□□□ -1.56
PTPRC-209ENST00000442510 MBD3L1Q8WWY6 194 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 CXorf58Q96LI9 332 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 LRFN3Q9BTN0 628 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 CLMPQ9H6B4 373 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 JPH1Q9HDC5 661 aaPredicted RBP5.3□□□□□ -1.56
PTPRC-209ENST00000442510 ACP6Q9NPH0 428 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 ACOT13Q9NPJ3 140 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 DTX4Q9Y2E6 619 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 NAP1L6A6NFF2 107 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 MASP2O00187 686 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 VEGFDO43915 354 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 WDR1O75083 606 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 RGS11O94810 467 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 PFKLP17858 780 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 AGXTP21549 392 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 PTGER2P43116 358 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 PRELPP51888 382 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 USP50Q70EL3 339 aaPredicted RBP5.3□□□□□ -1.56
PTPRC-209ENST00000442510 LAX1Q8IWV1 398 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 FAM24BQ8N5W8 94 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 FAM71CQ8NEG0 241 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 OR4A4PQ8NGN8 299 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 OR6X1Q8NH79 312 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 OR10J5Q8NHC4 309 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 FEZF2Q8TBJ5 459 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 SKA2Q8WVK7 121 aaPredicted RBP5.3□□□□□ -1.56
PTPRC-209ENST00000442510 OSTF1Q92882 214 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 ZNF583Q96ND8 569 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 SLC22A12Q96S37 553 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 CBLN4Q9NTU7 201 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 IMP3Q9NV31 184 aaKnown RBP5.3□□□□□ -1.56
PTPRC-209ENST00000442510 GDE1Q9NZC3 331 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 OR6C3Q9NZP0 311 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 RPS6KB2Q9UBS0 482 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 MAGI1Q96QZ7 1491 aaPredicted RBP5.3□□□□□ -1.56
PTPRC-209ENST00000442510 ARAP3Q8WWN8 1544 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 C17orf105B2RV13 164 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 APOC4-APOC2K7ER74 178 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 AOC2O75106 756 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 GLSO94925 669 aaPredicted RBP5.3□□□□□ -1.56
PTPRC-209ENST00000442510 CD46P15529 392 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 RPA2P15927 270 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 ZNF30P17039 623 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 HOXB8P17481 243 aaPredicted RBP5.3□□□□□ -1.56
PTPRC-209ENST00000442510 HNRNPA2B1P22626 353 aaKnown RBP5.3□□□□□ -1.56
PTPRC-209ENST00000442510 GNA15P30679 374 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 CLDN20P56880 219 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 AQP6Q13520 282 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 ACKR1Q16570 336 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 EML3Q32P44 896 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 ARL13AQ5H913 290 aaPredicted RBP5.3□□□□□ -1.56
PTPRC-209ENST00000442510 CST9LP1Q5W188 147 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 TMEM198Q66K66 360 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 C22orf42Q6IC83 251 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 EPGNQ6UW88 154 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 SERPINA13PQ6UXR4 307 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 TMPRSS11FQ6ZWK6 438 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 NKAPQ8N5F7 415 aaKnown RBP5.3□□□□□ -1.56
PTPRC-209ENST00000442510 FRMD1Q8N878 549 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 GPR26Q8NDV2 337 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 OR5D18Q8NGL1 313 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 SPACA9Q96E40 222 aaPredicted RBP5.3□□□□□ -1.56
PTPRC-209ENST00000442510 FCRL4Q96PJ5 515 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 ZSCAN10Q96SZ4 725 aaPredicted RBP5.3□□□□□ -1.56
PTPRC-209ENST00000442510 PRRX2Q99811 253 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 CDK19Q9BWU1 502 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 SEMA6BQ9H3T3 888 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 TMEM231Q9H6L2 316 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 FBXO7Q9Y3I1 522 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 LAMC3Q9Y6N6 1575 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 MYH11P35749 1972 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 NPHP4O75161 1426 aaPredicted RBP5.3□□□□□ -1.56
PTPRC-209ENST00000442510 ANXA9O76027 345 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 INHBBP09529 407 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 EBLN1P0CF75 366 aa5.3□□□□□ -1.56
PTPRC-209ENST00000442510 HIST1H1BP16401 226 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms