RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 LHPPQ9H008 270 aa12.25□□□□□ -0.45
CPSF4-206ENST00000441580 ZNF768Q9H5H4 540 aaKnown RBP12.25□□□□□ -0.45
CPSF4-206ENST00000441580 SLC25A19Q9HC21 320 aa12.25□□□□□ -0.45
CPSF4-206ENST00000441580 C11orf16Q9NQ32 467 aa12.25□□□□□ -0.45
CPSF4-206ENST00000441580 ZNF226Q9NYT6 803 aa12.25□□□□□ -0.45
CPSF4-206ENST00000441580 ERVK-18Q9QC07 812 aa12.25□□□□□ -0.45
CPSF4-206ENST00000441580 PSORS1C1Q9UIG5 152 aa12.25□□□□□ -0.45
CPSF4-206ENST00000441580 SRPK3Q9UPE1 567 aa12.25□□□□□ -0.45
CPSF4-206ENST00000441580 TNRC18O15417 2968 aaPredicted RBP12.24□□□□□ -0.45
CPSF4-206ENST00000441580 TRAPPC13A5PLN9 417 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 CLCA1A8K7I4 914 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 H3BMH7 237 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 H3BMQ9 156 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 DSCR3O14972 297 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 FADS2O95864 444 aaKnown RBP12.24□□□□□ -0.45
CPSF4-206ENST00000441580 ANKRD34CP0C6C1 535 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 GIMD1P0DJR0 217 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 FBLP22087 321 aaKnown RBP12.24□□□□□ -0.45
CPSF4-206ENST00000441580 MMP11P24347 488 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 FPR3P25089 353 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 CNR2P34972 360 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 GCGRP47871 477 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 FUT7Q11130 342 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 TSPAN31Q12999 210 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 SHBQ15464 509 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 AMZ1Q400G9 498 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 FLYWCH1Q4VC44 716 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 CCNJQ5T5M9 372 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 MRPL2Q5T653 305 aaKnown RBP12.24□□□□□ -0.45
CPSF4-206ENST00000441580 LAIR1Q6GTX8 287 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 PTCHD4Q6ZW05 846 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 RRM2BQ7LG56 351 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 KANSL1Q7Z3B3 1105 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 HMGN2P46Q86SG4 172 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 CCDC103Q8IW40 242 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 CMIPQ8IY22 773 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 OR4C6Q8NH72 309 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 FAR1Q8WVX9 515 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 PIK3R3Q92569 461 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 SGCDQ92629 289 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 NAT6Q93015 286 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 ART5Q96L15 291 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 COG8Q96MW5 612 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 DPYSL5Q9BPU6 564 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 TEX12Q9BXU0 123 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 TIMMDC1Q9NPL8 285 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 SEMA4GQ9NTN9 838 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 WARS2Q9UGM6 360 aaKnown RBP12.24□□□□□ -0.45
CPSF4-206ENST00000441580 ENPP5Q9UJA9 477 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 PILRBQ9UKJ0 227 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 CFL2Q9Y281 166 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 GPR55Q9Y2T6 319 aaPredicted RBP12.24□□□□□ -0.45
CPSF4-206ENST00000441580 CHST2Q9Y4C5 530 aa12.24□□□□□ -0.45
CPSF4-206ENST00000441580 A0A087WUU8 490 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 A0A1B0GX78 115 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 CDHR4A6H8M9 788 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 TRIM64BA6NI03 449 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 TGFBR3LH3BV60 316 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 FRS3O43559 492 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 CDC123O75794 336 aaPredicted RBP12.23□□□□□ -0.45
CPSF4-206ENST00000441580 KCNK2O95069 426 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 SOX14O95416 240 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 CDK1P06493 297 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 S1PR1P21453 382 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 FUT4P22083 530 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 POU1F1P28069 291 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 STAT5AP42229 794 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 MASP1P48740 699 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 EMDP50402 254 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 ST13P50502 369 aaKnown RBP12.23□□□□□ -0.45
CPSF4-206ENST00000441580 ZNF136P52737 540 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 SMSP52788 366 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 BNC1Q01954 994 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 EMX1Q04741 257 aaPredicted RBP12.23□□□□□ -0.45
CPSF4-206ENST00000441580 BNIP3Q12983 259 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 SMN1Q16637 294 aaKnown RBP12.23□□□□□ -0.45
CPSF4-206ENST00000441580 TMEM44Q2T9K0 475 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 SYT6Q5T7P8 510 aaPredicted RBP12.23□□□□□ -0.45
CPSF4-206ENST00000441580 UBE2UQ5VVX9 321 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 MEDAGQ5VYS4 303 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 CCDC81Q6ZN84 652 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 RASSF6Q6ZTQ3 369 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 MBOAT2Q6ZWT7 520 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 GRAMD2AQ8IUY3 354 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 CLIP4Q8N3C7 705 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 METTL27Q8N6F8 245 aaPredicted RBP12.23□□□□□ -0.45
CPSF4-206ENST00000441580 CLDN22Q8N7P3 220 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 SIMC1Q8NDZ2 872 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 OR8J1Q8NGP2 316 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 ZNF559Q9BR84 538 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 CNPPD1Q9BV87 410 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 POLDIP3Q9BY77 421 aaKnown RBP12.23□□□□□ -0.45
CPSF4-206ENST00000441580 SPRTNQ9H040 489 aaPredicted RBP12.23□□□□□ -0.45
CPSF4-206ENST00000441580 GPN2Q9H9Y4 310 aaPredicted RBP12.23□□□□□ -0.45
CPSF4-206ENST00000441580 ACOT13Q9NPJ3 140 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 LANCL2Q9NS86 450 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 TMEM5Q9Y2B1 443 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 CLDN16Q9Y5I7 305 aa12.23□□□□□ -0.45
CPSF4-206ENST00000441580 GOLGA4Q13439 2230 aaKnown RBP12.23□□□□□ -0.45
CPSF4-206ENST00000441580 GXYLT2A0PJZ3 443 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms