RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 LIPJQ5W064 366 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 SLC27A4Q6P1M0 643 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 C19orf48Q6RUI8 117 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 CEACAM19Q7Z692 300 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 KIAA0907Q7Z7F0 614 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-209ENST00000439886 RPLP0P6Q8NHW5 317 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 TRMT10AQ8TBZ6 339 aaKnown RBP11.01□□□□□ -0.65
SMPD4-209ENST00000439886 UBTD2Q8WUN7 234 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 MS4A3Q96HJ5 214 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 CXorf36Q9H7Y0 433 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 DDX31Q9H8H2 851 aaKnown RBP11.01□□□□□ -0.65
SMPD4-209ENST00000439886 RC3H2Q9HBD1 1191 aaKnown RBP11.01□□□□□ -0.65
SMPD4-209ENST00000439886 A0A0C4DFX4 3053 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 LINC00862A6NCI5 91 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 J3QLW9 94 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 GAPDHSO14556 408 aaPredicted RBP11□□□□□ -0.65
SMPD4-209ENST00000439886 ARPC5O15511 151 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 MPC2O95563 127 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 LDOC1O95751 146 aaPredicted RBP11□□□□□ -0.65
SMPD4-209ENST00000439886 ACADMP11310 421 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 ZNF19P17023 458 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 DDX6P26196 483 aaKnown RBP eCLIP11□□□□□ -0.652e-8■■■■■ 34.9
SMPD4-209ENST00000439886 MVDP53602 400 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 RAE1P78406 368 aaKnown RBP11□□□□□ -0.65
SMPD4-209ENST00000439886 SSX2Q16385 188 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 QSOX2Q6ZRP7 698 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 Q6ZVL8 140 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 ZER1Q7Z7L7 766 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 RBM18Q96H35 190 aaKnown RBP11□□□□□ -0.65
SMPD4-209ENST00000439886 WDR77Q9BQA1 342 aaPredicted RBP11□□□□□ -0.65
SMPD4-209ENST00000439886 CNTRLQ7Z7A1 2325 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 A0A1W2PRQ8 180 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 RNASET2O00584 256 aaKnown RBP11□□□□□ -0.65
SMPD4-209ENST00000439886 TSPAN6O43657 245 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 GPR37L1O60883 481 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 KHDRBS3O75525 346 aaKnown RBP11□□□□□ -0.65
SMPD4-209ENST00000439886 TFP02787 698 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 ARAFP10398 606 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 SLC1A3P43003 542 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 DGCR2P98153 550 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 OPCMLQ14982 345 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 C6orf120Q7Z4R8 191 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 CFAP206Q8IYR0 622 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 BBS1Q8NFJ9 593 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 CXorf58Q96LI9 332 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 TMEM175Q9BSA9 504 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 SLC19A3Q9BZV2 496 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 CFAP97Q9P2B7 532 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 KNL1Q8NG31 2342 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 C17orf113A0A1B0GUU1 675 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 POM121BA6NF01 834 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 SLC2A10O95528 541 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 RLN1P04808 185 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 PRG2P13727 222 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 SNRPBP14678 240 aaKnown RBP11□□□□□ -0.65
SMPD4-209ENST00000439886 GNSP15586 552 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 POU3F2P20265 443 aaPredicted RBP11□□□□□ -0.65
SMPD4-209ENST00000439886 PTAFRP25105 342 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 RFX3P48380 749 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 SMIM11AP58511 58 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 B4GALNT1Q00973 533 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 RING1Q06587 406 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 CRHR2Q13324 411 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 SPOUT1Q5T280 376 aaKnown RBP11□□□□□ -0.65
SMPD4-209ENST00000439886 C3P1Q6ZMU1 363 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 RNF180Q86T96 592 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 LRRTM4Q86VH4 590 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 TRAPPC5Q8IUR0 188 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 CCDC116Q8IYX3 515 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 CLRN3Q8NCR9 226 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 KIAA1143Q96AT1 154 aaPredicted RBP11□□□□□ -0.65
SMPD4-209ENST00000439886 TMEM68Q96MH6 324 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 IL17FQ96PD4 163 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 ISG20L2Q9H9L3 353 aaKnown RBP11□□□□□ -0.65
SMPD4-209ENST00000439886 ZFP64Q9NPA5 681 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 TMEM138Q9NPI0 162 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 STOX2Q9P2F5 926 aaPredicted RBP11□□□□□ -0.65
SMPD4-209ENST00000439886 FBXL2Q9UKC9 423 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 LAMA3Q16787 3333 aa11□□□□□ -0.65
SMPD4-209ENST00000439886 A0A1B0GV90 55 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 DAPL1A0PJW8 107 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 SLC19A2O60779 497 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 SOD1P00441 154 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 CKMP06732 381 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 PDHA2P29803 388 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 AHRP35869 848 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 SLC6A11P48066 632 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 STXBP1P61764 594 aaKnown RBP10.99□□□□□ -0.65
SMPD4-209ENST00000439886 AP1S1P61966 158 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 CHAF1BQ13112 559 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 ST3GAL2Q16842 350 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 TCTE1Q5JU00 501 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 SFRP5Q5T4F7 317 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 TRILQ7L0X0 811 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 OR4D11Q8NGI4 311 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 RBP7Q96R05 134 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 ABHD1Q96SE0 405 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 ARL6Q9H0F7 186 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 CAPN10Q9HC96 672 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 ZCCHC3Q9NUD5 404 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms