RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 PIPP12273 146 aaPredicted RBP10.94□□□□□ -0.66
SMAD3-202ENST00000439724 GALNSP34059 522 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 GABRA3P34903 492 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 STT3AP46977 705 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 EMDP50402 254 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 ST13P50502 369 aaKnown RBP10.94□□□□□ -0.66
SMAD3-202ENST00000439724 NUDT6P53370 316 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 OR1D5P58170 312 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 GPLD1P80108 840 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 PSG6Q00889 435 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 NFATC3Q12968 1075 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 TSPAN31Q12999 210 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 BIKQ13323 160 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 IRF3Q14653 427 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 SHBQ15464 509 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 MAPK14Q16539 360 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 CASP12Q6UXS9 341 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 ZNF730Q6ZMV8 503 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 GDF7Q7Z4P5 450 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 RANBP3LQ86VV4 465 aaPredicted RBP10.94□□□□□ -0.66
SMAD3-202ENST00000439724 PLXDC1Q8IUK5 500 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 OR8J1Q8NGP2 316 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 PIGXQ8TBF5 258 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 MVB12AQ96EY5 273 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 MMABQ96EY8 250 aaPredicted RBP10.94□□□□□ -0.66
SMAD3-202ENST00000439724 SLC41A3Q96GZ6 507 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 Q96MT0 163 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 DGAT2Q96PD7 388 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 PRR14Q9BWN1 585 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 FBXO34Q9NWN3 711 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 KCNE5Q9UJ90 142 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 HEMK1Q9Y5R4 338 aaPredicted RBP10.94□□□□□ -0.66
SMAD3-202ENST00000439724 CDHR4A6H8M9 788 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 CLDN24A6NM45 220 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 PRAMEF2O60811 474 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 KCNK2O95069 426 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 IGFBP1P08833 259 aaPredicted RBP10.94□□□□□ -0.66
SMAD3-202ENST00000439724 PSMB9P28065 219 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 CD1CP29017 333 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 SLC15A1P46059 708 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 GCGRP47871 477 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 OMPP47874 163 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 BTG2P78543 158 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 HSD11B2P80365 405 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 LSM11P83369 360 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMAD3-202ENST00000439724 CDK5Q00535 292 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 BNC1Q01954 994 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 CFHR1Q03591 330 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 BNIP3Q12983 259 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 SERTAD2Q14140 314 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 ZNHIT3Q15649 155 aaPredicted RBP10.94□□□□□ -0.66
SMAD3-202ENST00000439724 OCLNQ16625 522 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 SYT16Q17RD7 645 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 MRPL2Q5T653 305 aaKnown RBP10.94□□□□□ -0.66
SMAD3-202ENST00000439724 LYSMD4Q5XG99 296 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 RASSF6Q6ZTQ3 369 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 PRSS42Q7Z5A4 293 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 KMT5CQ86Y97 462 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 DEFB123Q8N688 67 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 OR51Q1Q8NH59 317 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 C9orf43Q8TAL5 461 aaPredicted RBP10.94□□□□□ -0.66
SMAD3-202ENST00000439724 VSTM2LQ96N03 204 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 ELF4Q99607 663 aaPredicted RBP10.94□□□□□ -0.66
SMAD3-202ENST00000439724 GPA33Q99795 319 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 DCUN1D5Q9BTE7 237 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 POLDIP3Q9BY77 421 aaKnown RBP10.94□□□□□ -0.66
SMAD3-202ENST00000439724 ARMC7Q9H6L4 198 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 AMBNQ9NP70 447 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 CUTCQ9NTM9 273 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 GPR83Q9NYM4 423 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 TESQ9UGI8 421 aaKnown RBP10.94□□□□□ -0.66
SMAD3-202ENST00000439724 KLHL3Q9UH77 587 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 TMEM184BQ9Y519 407 aaPredicted RBP10.94□□□□□ -0.66
SMAD3-202ENST00000439724 ADAMTS20P59510 1910 aa10.93□□□□□ -0.66
SMAD3-202ENST00000439724 TRAPPC13A5PLN9 417 aa10.93□□□□□ -0.66
SMAD3-202ENST00000439724 PEX12O00623 359 aa10.93□□□□□ -0.66
SMAD3-202ENST00000439724 KLF4O43474 513 aa10.93□□□□□ -0.66
SMAD3-202ENST00000439724 CDC123O75794 336 aaPredicted RBP10.93□□□□□ -0.66
SMAD3-202ENST00000439724 OR2B3O76000 313 aa10.93□□□□□ -0.66
SMAD3-202ENST00000439724 THY1P04216 161 aa10.93□□□□□ -0.66
SMAD3-202ENST00000439724 LCKP06239 509 aa10.93□□□□□ -0.66
SMAD3-202ENST00000439724 MSL3P1P0C860 447 aa10.93□□□□□ -0.66
SMAD3-202ENST00000439724 TNNI3P19429 210 aa10.93□□□□□ -0.66
SMAD3-202ENST00000439724 FPR3P25089 353 aa10.93□□□□□ -0.66
SMAD3-202ENST00000439724 C21orf33P30042 268 aaPredicted RBP10.93□□□□□ -0.66
SMAD3-202ENST00000439724 SSTR4P31391 388 aa10.93□□□□□ -0.66
SMAD3-202ENST00000439724 CSF2RBP32927 897 aa10.93□□□□□ -0.66
SMAD3-202ENST00000439724 GIPRP48546 466 aa10.93□□□□□ -0.66
SMAD3-202ENST00000439724 ARRB1P49407 418 aaPredicted RBP10.93□□□□□ -0.66
SMAD3-202ENST00000439724 HOXC5Q00444 222 aa10.93□□□□□ -0.66
SMAD3-202ENST00000439724 FUT7Q11130 342 aa10.93□□□□□ -0.66
SMAD3-202ENST00000439724 ST3GAL4Q11206 333 aa10.93□□□□□ -0.66
SMAD3-202ENST00000439724 SRSF5Q13243 272 aaKnown RBP10.93□□□□□ -0.66
SMAD3-202ENST00000439724 ERV3-1Q14264 604 aa10.93□□□□□ -0.66
SMAD3-202ENST00000439724 GINS1Q14691 196 aa10.93□□□□□ -0.66
SMAD3-202ENST00000439724 CTF1Q16619 201 aa10.93□□□□□ -0.66
SMAD3-202ENST00000439724 SLC25A30Q5SVS4 291 aa10.93□□□□□ -0.66
SMAD3-202ENST00000439724 FIGNL1Q6PIW4 674 aa10.93□□□□□ -0.66
SMAD3-202ENST00000439724 MBOAT2Q6ZWT7 520 aa10.93□□□□□ -0.66
SMAD3-202ENST00000439724 RRM2BQ7LG56 351 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms