RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	MYADM	Q96S97	322 aa		15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	COQ7	Q99807	217 aa		15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	GABRG3	Q99928	467 aa		15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	MOV10	Q9HCE1	1003 aa	Known RBP	15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	ZNF624	Q9P2J8	865 aa	Predicted RBP	15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	CDH10	Q9Y6N8	788 aa		15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145		A0A1W2PQ09	198 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	TNFSF14	O43557	240 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	HTR1F	P30939	366 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	MAT2A	P31153	395 aa	Known RBP	15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	SEC13	P55735	322 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	PPP2CB	P62714	309 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	PPP2CA	P67775	309 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	EEF1A1	P68104	462 aa	Known RBP	15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	CRTC2	Q53ET0	693 aa	Predicted RBP	15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	TMEM196	Q5HYL7	178 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	NXNL2	Q5VZ03	156 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	ZNF544	Q6NX49	715 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	ZNF836	Q6ZNA1	936 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	SHF	Q7M4L6	423 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	PEX5L	Q8IYB4	626 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	OR6F1	Q8NGZ6	308 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	OR2A5	Q96R48	311 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	SERINC2	Q96SA4	455 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	TM9SF2	Q99805	663 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	SLC6A17	Q9H1V8	727 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	POM121B	A6NF01	834 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	SLC31A1	O15431	190 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	LRRTM2	O43300	516 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	PIP5K1C	O60331	668 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	LALBA	P00709	142 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	THBS1	P07996	1170 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	RPS4Y1	P22090	263 aa	Known RBP	15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	AZGP1	P25311	298 aa	Known RBP	15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	GPR4	P46093	362 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	DUSP8	Q13202	625 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	DSG2	Q14126	1118 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	ARMC4	Q5T2S8	1044 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	FHL5	Q5TD97	284 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	DDI2	Q5TDH0	399 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	USP53	Q70EK8	1073 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	OR4K14	Q8NGD5	310 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	OR52N1	Q8NH53	320 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	TMEM255B	Q8WV15	326 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	AP3S1	Q92572	193 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	SLC22A18	Q96BI1	424 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	SOST	Q9BQB4	213 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	TEX12	Q9BXU0	123 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	NLGN3	Q9NZ94	848 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	PTGFRN	Q9P2B2	879 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	GSTK1	Q9Y2Q3	226 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	WDR45	Q9Y484	360 aa		15	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	TBC1D3D	A0A087WVF3	549 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	TBC1D3I	A0A087WXS9	549 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	TBC1D3E	A0A087X179	549 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145		A6NCN8	305 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	TBC1D3L	B9A6J9	549 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145		J3QRE1	110 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	POLR1C	O15160	346 aa	Predicted RBP	14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	P2RX6	O15547	441 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	SLC35G6	P0C7Q6	338 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	TBC1D3H	P0C7X1	549 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	CPN2	P22792	545 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	NTSR1	P30989	418 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	HOXD12	P35452	270 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	SCN1B	Q07699	218 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	RUNX2	Q13950	521 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	COL9A2	Q14055	689 aa	Predicted RBP	14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	KIR2DS3	Q14952	304 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	DUSP5	Q16690	384 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	TBC1D3C	Q6IPX1	549 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	PARM1	Q6UWI2	310 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	FAM131A	Q6UXB0	335 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	TBC1D3	Q8IZP1	549 aa	Predicted RBP	14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	SIMC1	Q8NDZ2	872 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	OR4F15	Q8NGB8	312 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	SDF2	Q99470	211 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	PRSS27	Q9BQR3	290 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	FBRS	Q9HAH7	460 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	TIGAR	Q9NQ88	270 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	CBLC	Q9ULV8	474 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	ZNF232	Q9UNY5	417 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	CDC42EP2	O14613	210 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	CTSV	O60911	334 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	CCNK	O75909	580 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	HMGN1	P05114	100 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	CSF3	P09919	207 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	AK4	P27144	223 aa	Predicted RBP	14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	FZD5	Q13467	585 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	SUZ12	Q15022	739 aa	Known RBP	14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	SYCE2	Q6PIF2	218 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	ZNF517	Q6ZMY9	492 aa	Predicted RBP	14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	LHFPL3	Q86UP9	236 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	RAB43	Q86YS6	212 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	OR2T33	Q8NG76	320 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	BRIX1	Q8TDN6	353 aa	Known RBP	14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	FGF14	Q92915	247 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	ZNF350	Q9GZX5	532 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	SRMS	Q9H3Y6	488 aa		14.99	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	TOR4A	Q9NXH8	423 aa		14.99	□□□□□ -0.01

Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms