RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 SLC16A10Q8TF71 515 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 FBXO17Q96EF6 278 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 PDXPQ96GD0 296 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 OR1F2PQ96R84 312 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 PLA2G12AQ9BZM1 189 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 PITHD1Q9GZP4 211 aaPredicted RBP7.02□□□□□ -1.29
CPSF6-202ENST00000435070 QRSL1Q9H0R6 528 aaKnown RBP7.02□□□□□ -1.29
CPSF6-202ENST00000435070 C20orf85Q9H1P6 137 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 C1orf226A1L170 272 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 TRABD2BA6NFA1 517 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 TMEM200CA6NKL6 621 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 FAM183AA6NL82 134 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 SCAMP2O15127 329 aaKnown RBP7.02□□□□□ -1.29
CPSF6-202ENST00000435070 PGRMC2O15173 223 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 THP07101 528 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 SYN1P17600 705 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 S100A11P31949 105 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 GRK4P32298 578 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 HNF1BP35680 557 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 SLC1A3P43003 542 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 PREPP48147 710 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 CTSCP53634 463 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 CDH11P55287 796 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 TCTN3Q6NUS6 607 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 FBXO42Q6P3S6 717 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 PLA2G15Q8NCC3 412 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 BPIFCQ8NFQ6 507 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 OR8J2Q8NGG1 315 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 OR10K1Q8NGX5 313 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 OR1S1Q8NH92 325 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 SCARB1Q8WTV0 552 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 ZFPM2Q8WW38 1151 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 THAP4Q8WY91 577 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 KAT2AQ92830 837 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 SLC19A3Q9BZV2 496 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 WDR26Q9H7D7 661 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 ISG20L2Q9H9L3 353 aaKnown RBP7.02□□□□□ -1.29
CPSF6-202ENST00000435070 BIN3Q9NQY0 253 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 AKAP7Q9P0M2 348 aaPredicted RBP7.02□□□□□ -1.29
CPSF6-202ENST00000435070 FBXW2Q9UKT8 454 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 METTL21EPA6NDL7 271 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 SOX30O94993 753 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 FGF9P31371 208 aaPredicted RBP7.02□□□□□ -1.29
CPSF6-202ENST00000435070 RHOAP61586 193 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 CAMK1Q14012 370 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 C12orf73Q69YU5 71 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 TRIM40Q6P9F5 258 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 OAFQ86UD1 273 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 GPA33Q99795 319 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 ARHGAP9Q9BRR9 750 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 DNTTIP1Q9H147 329 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 RHBGQ9H310 441 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 MTG2Q9H4K7 406 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 PNO1Q9NRX1 252 aaKnown RBP7.02□□□□□ -1.29
CPSF6-202ENST00000435070 C14orf105Q9NVL8 296 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 SOHLH2Q9NX45 425 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 KLF2Q9Y5W3 355 aaPredicted RBP7.02□□□□□ -1.29
CPSF6-202ENST00000435070 ABHD14A-ACY1A0A1B0GW23 586 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 SELENOFO60613 162 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 RNGTTO60942 597 aaKnown RBP7.01□□□□□ -1.29
CPSF6-202ENST00000435070 FGF18O76093 207 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 SPP1P10451 314 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 DGKGP49619 791 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 TAP2Q03519 686 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 CACNG1Q06432 222 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 IKZF1Q13422 519 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 AADACL4Q5VUY2 407 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 OLFML2AQ68BL7 652 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 OR56B4Q8NH76 319 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 FOXJ1Q92949 421 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 CHST8Q9H2A9 424 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 CSNK1G1Q9HCP0 422 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 TESQ9UGI8 421 aaKnown RBP7.01□□□□□ -1.29
CPSF6-202ENST00000435070 POLR1DQ9Y2S0 133 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 PCYT1BQ9Y5K3 369 aaPredicted RBP7.01□□□□□ -1.29
CPSF6-202ENST00000435070 SUSD5O60279 629 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 FMO6PO60774 539 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 GPR32O75388 356 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 EIF3GO75821 320 aaKnown RBP eCLIP7.01□□□□□ -1.29
CPSF6-202ENST00000435070 KRT33AO76009 404 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 IDSP22304 550 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 PTSQ03393 145 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 TGM3Q08188 693 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 SMAD2Q15796 467 aaKnown RBP7.01□□□□□ -1.29
CPSF6-202ENST00000435070 TMUB2Q71RG4 321 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 MMP21Q8N119 569 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 TMEM185AQ8NFB2 350 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 SFT2D1Q8WV19 159 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 PPP1R14DQ9NXH3 145 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 MARCH2Q9P0N8 246 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 RUVBL1Q9Y265 456 aaKnown RBP7.01□□□□□ -1.29
CPSF6-202ENST00000435070 PLSCR5A0PG75 271 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 AGAP14A8MT82 685 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 RASGRP1O95267 797 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 PPIBP23284 216 aaKnown RBP7.01□□□□□ -1.29
CPSF6-202ENST00000435070 MMP11P24347 488 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 ACVR1BP36896 505 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 EIF4EBP2Q13542 120 aaPredicted RBP7.01□□□□□ -1.29
CPSF6-202ENST00000435070 PABPC1L2AQ5JQF8 200 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 TMEM255AQ5JRV8 349 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms