RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 DHTKD1Q96HY7 919 aaPredicted RBP4.82□□□□□ -1.64
USP54-206ENST00000433394 VGLL1Q99990 258 aa4.82□□□□□ -1.64
USP54-206ENST00000433394 ADNPQ9H2P0 1102 aa4.82□□□□□ -1.64
USP54-206ENST00000433394 RNF14Q9UBS8 474 aa4.82□□□□□ -1.64
USP54-206ENST00000433394 NTNG1Q9Y2I2 539 aa4.82□□□□□ -1.64
USP54-206ENST00000433394 WDR45Q9Y484 360 aa4.82□□□□□ -1.64
USP54-206ENST00000433394 KIF26BQ2KJY2 2108 aa4.82□□□□□ -1.64
USP54-206ENST00000433394 IGHV3-16A0A0C4DH30 117 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 CLRN2A0PK11 232 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 RPL37AP8A6NKH3 93 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 PPIAL4DF5H284 164 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.81□□□□□ -1.64
USP54-206ENST00000433394 DUX1O43812 170 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 RAMP1O60894 148 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 TRIM3O75382 744 aaPredicted RBP4.81□□□□□ -1.64
USP54-206ENST00000433394 CHRNA1P02708 482 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 CLUP10909 449 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 DRD5P21918 477 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 GSK3BP49841 420 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 HNMTP50135 292 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 MESDQ14696 234 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 LGSNQ5TDP6 509 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 OR8G2PQ6IF36 304 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 ADAMTSL5Q6ZMM2 481 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 ANKRD37Q7Z713 158 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 PARGQ86W56 976 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 IFNEQ86WN2 208 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 CSNK1G2-AS1Q8NCQ2 148 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 TRMT10AQ8TBZ6 339 aaKnown RBP4.81□□□□□ -1.64
USP54-206ENST00000433394 RAET1EQ8TD07 263 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 SPRYD4Q8WW59 207 aaPredicted RBP4.81□□□□□ -1.64
USP54-206ENST00000433394 IL1F10Q8WWZ1 152 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 CTNNBL1Q8WYA6 563 aaPredicted RBP4.81□□□□□ -1.64
USP54-206ENST00000433394 ZBED6CLQ96FA7 236 aaPredicted RBP4.81□□□□□ -1.64
USP54-206ENST00000433394 C4orf36Q96KX1 117 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 CRACR2AQ9BSW2 395 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 SLC25A51Q9H1U9 297 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 EXOSC3Q9NQT5 275 aaKnown RBP4.81□□□□□ -1.64
USP54-206ENST00000433394 ELOVL2Q9NXB9 296 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 MRPL39Q9NYK5 338 aaKnown RBP4.81□□□□□ -1.64
USP54-206ENST00000433394 GMPPBQ9Y5P6 360 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 TARBP1Q13395 1621 aaKnown RBP4.81□□□□□ -1.64
USP54-206ENST00000433394 GOLGA3Q08378 1498 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 FER1L5A0AVI2 2057 aa4.81□□□□□ -1.64
USP54-206ENST00000433394 ABCA5Q8WWZ7 1642 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 EPM2AB3EWF7 344 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 K7EQM0 130 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 XPO1O14980 1071 aaKnown RBP4.8□□□□□ -1.64
USP54-206ENST00000433394 TM9SF1O15321 606 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 BCAS1O75363 584 aaPredicted RBP4.8□□□□□ -1.64
USP54-206ENST00000433394 SERPINB2P05120 415 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 ATP5A1P25705 553 aaKnown RBP4.8□□□□□ -1.64
USP54-206ENST00000433394 RPL4P36578 427 aaKnown RBP4.8□□□□□ -1.64
USP54-206ENST00000433394 GBX2P52951 348 aaPredicted RBP4.8□□□□□ -1.64
USP54-206ENST00000433394 RPS6P62753 249 aaKnown RBP4.8□□□□□ -1.64
USP54-206ENST00000433394 CBX1P83916 185 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 SPIBQ01892 262 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 PLOD1Q02809 727 aaPredicted RBP4.8□□□□□ -1.64
USP54-206ENST00000433394 CAMK4Q16566 473 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 SEL1L2Q5TEA6 688 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 RFWD3Q6PCD5 774 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 CASC1Q6TDU7 716 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 KDELC1Q6UW63 502 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 ZNF497Q6ZNH5 498 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 HSD11B1LQ7Z5J1 315 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 SLC22A18ASQ8N1D0 253 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 FLVCR1-AS1Q8TAF5 88 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 ADIPOR1Q96A54 375 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 ZNF607Q96SK3 696 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 CCDC28BQ9BUN5 200 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 UBXN6Q9BZV1 441 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 IMPAD1Q9NX62 359 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 AIPL1Q9NZN9 384 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 CYTH4Q9UIA0 394 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 RNF115Q9Y4L5 304 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 PRXQ9BXM0 1461 aa4.8□□□□□ -1.64
USP54-206ENST00000433394 E9PAM4 449 aa4.79□□□□□ -1.64
USP54-206ENST00000433394 GALR3O60755 368 aaPredicted RBP4.79□□□□□ -1.64
USP54-206ENST00000433394 N4BP1O75113 896 aaKnown RBP4.79□□□□□ -1.64
USP54-206ENST00000433394 MTX2O75431 263 aa4.79□□□□□ -1.64
USP54-206ENST00000433394 UFL1O94874 794 aa4.79□□□□□ -1.64
USP54-206ENST00000433394 IGHV3-13P01766 116 aa4.79□□□□□ -1.64
USP54-206ENST00000433394 ETV5P41161 510 aa4.79□□□□□ -1.64
USP54-206ENST00000433394 MAGEA5P43359 124 aa4.79□□□□□ -1.64
USP54-206ENST00000433394 VEGFCP49767 419 aa4.79□□□□□ -1.64
USP54-206ENST00000433394 CSTF1Q05048 431 aaKnown RBP4.79□□□□□ -1.64
USP54-206ENST00000433394 RGS1Q08116 209 aa4.79□□□□□ -1.64
USP54-206ENST00000433394 SLC10A1Q14973 349 aa4.79□□□□□ -1.64
USP54-206ENST00000433394 ATXN7L3Q14CW9 347 aaPredicted RBP4.79□□□□□ -1.64
USP54-206ENST00000433394 CCL14Q16627 93 aa4.79□□□□□ -1.64
USP54-206ENST00000433394 PPP1R3AQ16821 1122 aa4.79□□□□□ -1.64
USP54-206ENST00000433394 GLIPR1L2Q4G1C9 344 aa4.79□□□□□ -1.64
USP54-206ENST00000433394 CES3Q6UWW8 571 aa4.79□□□□□ -1.64
USP54-206ENST00000433394 TMEM110Q86TL2 294 aa4.79□□□□□ -1.64
USP54-206ENST00000433394 Q8N377 158 aa4.79□□□□□ -1.64
USP54-206ENST00000433394 ZNF491Q8N8L2 437 aa4.79□□□□□ -1.64
USP54-206ENST00000433394 OR2L2Q8NH16 312 aa4.79□□□□□ -1.64
USP54-206ENST00000433394 FNDC8Q8TC99 324 aa4.79□□□□□ -1.64
USP54-206ENST00000433394 RPP25Q9BUL9 199 aaKnown RBP4.79□□□□□ -1.64
USP54-206ENST00000433394 CRNKL1Q9BZJ0 848 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms