RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 HHEXQ03014 270 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 OXA1LQ15070 435 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 MED22Q15528 200 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 INAQ16352 499 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 EIPR1Q53HC9 387 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 DCST2Q5T1A1 773 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 SLC27A4Q6P1M0 643 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 ZNF730Q6ZMV8 503 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 PLEKHM3Q6ZWE6 761 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 MBOAT2Q6ZWT7 520 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 PARGQ86W56 976 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 ZNF761Q86XN6 746 aaPredicted RBP12.99□□□□□ -0.33
HOXC4-202ENST00000430889 CLDN22Q8N7P3 220 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 MCFD2Q8NI22 146 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 PIGXQ8TBF5 258 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 FAM174AQ8TBP5 190 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 ZDHHC1Q8WTX9 485 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 FAM46AQ96IP4 442 aaKnown RBP12.99□□□□□ -0.33
HOXC4-202ENST00000430889 LRR1Q96L50 414 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 PRSS27Q9BQR3 290 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 MROQ9BYG7 248 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 ARMC7Q9H6L4 198 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 FGF20Q9NP95 211 aaPredicted RBP12.99□□□□□ -0.33
HOXC4-202ENST00000430889 IL20Q9NYY1 176 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 CNIH4Q9P003 139 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 SPACA6W5XKT8 324 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 AP3D1O14617 1153 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 CBFA2T3O75081 653 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 CBX7O95931 251 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 GUSBP08236 651 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 ALOX5P09917 674 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 SRFP11831 508 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 CKMT1AP12532 417 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 S1PR1P21453 382 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 VSX2P58304 361 aaPredicted RBP12.99□□□□□ -0.33
HOXC4-202ENST00000430889 ITGADQ13349 1161 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 C1orf61Q13536 156 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 GAS6Q14393 721 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 LARS2Q15031 903 aaKnown RBP12.99□□□□□ -0.33
HOXC4-202ENST00000430889 SPHARQ15513 63 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 RGS21Q2M5E4 152 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 FLYWCH1Q4VC44 716 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 C3orf38Q5JPI3 329 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 CCNJQ5T5M9 372 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 OR4Q3Q8NH05 313 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 TEX47Q8TBZ9 253 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 PMM1Q92871 262 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 CHCHD6Q9BRQ6 235 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 MND1Q9BWT6 205 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 PLSCR2Q9NRY7 297 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 FBXO34Q9NWN3 711 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 ZNF223Q9UK11 482 aaPredicted RBP12.99□□□□□ -0.33
HOXC4-202ENST00000430889 IGHV1OR15-9A0A0B4J2B8 117 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 A0A1W2PR77 199 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 SGK494L7N484 410 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 HAX1O00165 279 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 PRODHO43272 600 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 PIP5K1CO60331 668 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 STX11O75558 287 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 NKX2-2O95096 273 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 MED26O95402 600 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 AK1P00568 194 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 DBIP07108 87 aaKnown RBP12.98□□□□□ -0.33
HOXC4-202ENST00000430889 HSMCR30P0CW71 290 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 NID1P14543 1247 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 HTR2AP28223 471 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 CRYBB2P43320 205 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 BLKP51451 505 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 MLLT11Q13015 90 aaPredicted RBP12.98□□□□□ -0.33
HOXC4-202ENST00000430889 SMAD4Q13485 552 aaKnown RBP12.98□□□□□ -0.33
HOXC4-202ENST00000430889 TIMM50Q3ZCQ8 353 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 PAQR6Q6TCH4 344 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 ZNF620Q6ZNG0 422 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 DGAT2L6Q6ZPD8 337 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 CYP4Z2PQ8N1L4 340 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 AMER2Q8N7J2 671 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 C19orf47Q8N9M1 422 aaKnown RBP12.98□□□□□ -0.33
HOXC4-202ENST00000430889 DOK4Q8TEW6 326 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 TMEM255BQ8WV15 326 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 KLHDC7BQ96G42 594 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 ZNF285Q96NJ3 590 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 TTYH1Q9H313 450 aaPredicted RBP12.98□□□□□ -0.33
HOXC4-202ENST00000430889 UCK1Q9HA47 277 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 ADAP2Q9NPF8 381 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 POLE3Q9NRF9 147 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 STARD5Q9NSY2 213 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 NDUFB11Q9NX14 153 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 ZNF232Q9UNY5 417 aa12.98□□□□□ -0.33
HOXC4-202ENST00000430889 LOC100506127A0A0U1RQW1 187 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 CDHR4A6H8M9 788 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 BRINP1O60477 761 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 FMO6PO60774 539 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 PFDN1O60925 122 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 RDH16O75452 317 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 RAB36O95755 333 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 WNT1P04628 370 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 SLC35E2P0CK97 266 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 PRG2P13727 222 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 CTSEP14091 401 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 TYRP1P17643 537 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms