RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 TGIF1Q15583 401 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 ZNHIT3Q15649 155 aaPredicted RBP8.2□□□□□ -1.1
SMC6-204ENST00000428868 IFI44LQ53G44 452 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 PRAMEF8Q5VWM4 474 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 PRAMEF7Q5VXH5 474 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 TBPL2Q6SJ96 375 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 KIRREL2Q6UWL6 708 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 FKBP9P1Q75LS8 142 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 TMPRSS7Q7RTY8 843 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 CARM1Q86X55 608 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 NLGN4XQ8N0W4 816 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 METTL25Q8N6Q8 603 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 NLGN4YQ8NFZ3 816 aaPredicted RBP8.2□□□□□ -1.1
SMC6-204ENST00000428868 OR52P1PQ8NH57 321 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 TMBIM1Q969X1 311 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 VPS50Q96JG6 964 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 SLC46A1Q96NT5 459 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 ZNF607Q96SK3 696 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 SLC29A1Q99808 456 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 CIB1Q99828 191 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 RASSF4Q9H2L5 321 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 POLR1BQ9H9Y6 1135 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 RLIMQ9NVW2 624 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 C6orf203Q9P0P8 240 aaPredicted RBP8.2□□□□□ -1.1
SMC6-204ENST00000428868 STOML1Q9UBI4 398 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 PRODH2Q9UF12 536 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 IL17BQ9UHF5 180 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 NXT1Q9UKK6 140 aaKnown RBP8.2□□□□□ -1.1
SMC6-204ENST00000428868 CDV3Q9UKY7 258 aaKnown RBP8.2□□□□□ -1.1
SMC6-204ENST00000428868 TCFL5Q9UL49 500 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 CBLCQ9ULV8 474 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 PPIEQ9UNP9 301 aaKnown RBP8.2□□□□□ -1.1
SMC6-204ENST00000428868 SH3GLB1Q9Y371 365 aa8.2□□□□□ -1.1
SMC6-204ENST00000428868 FRG2CA6NGY1 282 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 NPIPB9F8W1W9 429 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 FFAR1O14842 300 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 OIP5O43482 229 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 MAN1A2O60476 641 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 TPST2O60704 377 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 STX11O75558 287 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 PRSS23O95084 383 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 NADKO95544 446 aaPredicted RBP8.19□□□□□ -1.1
SMC6-204ENST00000428868 NTN1O95631 604 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 LGI1O95970 557 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 AGR2O95994 175 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 CST1P01037 141 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 LDLRP01130 860 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 RAB40ALP0C0E4 278 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 CCNYL3P0C7X3 344 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 PRG2P13727 222 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 GCKP35557 465 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 DCTP40126 519 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 VHLP40337 213 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 PPICP45877 212 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 AQP4P55087 323 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 EEF1A1P68104 462 aaKnown RBP8.19□□□□□ -1.1
SMC6-204ENST00000428868 RNF4P78317 190 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 HOXC5Q00444 222 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 FOXD4Q12950 439 aaPredicted RBP8.19□□□□□ -1.1
SMC6-204ENST00000428868 CAMK2BQ13554 666 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 ELOAQ14241 798 aaKnown RBP8.19□□□□□ -1.1
SMC6-204ENST00000428868 NRF1Q16656 503 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 NDUFAF6Q330K2 333 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 GRAMD1BQ3KR37 738 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 FLYWCH1Q4VC44 716 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 ZNF311Q5JNZ3 666 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 PDZK1Q5T2W1 519 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 TMEM164Q5U3C3 297 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 PIWIL3Q7Z3Z3 882 aaKnown RBP8.19□□□□□ -1.1
SMC6-204ENST00000428868 ZNF605Q86T29 641 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 CACTIN-AS1Q8N1I8 211 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 ESX1Q8N693 406 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 OR11G2Q8NGC1 345 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 OR6T1Q8NGN1 323 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 GEMIN6Q8WXD5 167 aaKnown RBP8.19□□□□□ -1.1
SMC6-204ENST00000428868 VMP1Q96GC9 406 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 NAF1Q96HR8 494 aaKnown RBP8.19□□□□□ -1.1
SMC6-204ENST00000428868 LCORQ96JN0 433 aaPredicted RBP8.19□□□□□ -1.1
SMC6-204ENST00000428868 ART5Q96L15 291 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 IMMP1LQ96LU5 166 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 ZNF354BQ96LW1 612 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 LPAR4Q99677 370 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 ARHGDIGQ99819 225 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 KLHDC3Q9BQ90 382 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 EFHD1Q9BUP0 239 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 PINK1Q9BXM7 581 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 RTN4RQ9BZR6 473 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 ZNF700Q9H0M5 742 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 COQ10BQ9H8M1 238 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 Q9N2J8 555 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 IL1RAPQ9NPH3 570 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 CTPS2Q9NRF8 586 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 THSD1Q9NS62 852 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 CALML5Q9NZT1 146 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 NDUFAF4Q9P032 175 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 RHCGQ9UBD6 479 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 COPS7AQ9UBW8 275 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 OAZ3Q9UMX2 235 aa8.19□□□□□ -1.1
SMC6-204ENST00000428868 FARSAQ9Y285 508 aaKnown RBP8.19□□□□□ -1.1
SMC6-204ENST00000428868 OR10H1Q9Y4A9 318 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms