RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 GPRC6AQ5T6X5 926 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 ACSM2BQ68CK6 577 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 ZNF626Q68DY1 528 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 TMEM88Q6PEY1 159 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 MOB3CQ70IA8 216 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 SCD5Q86SK9 330 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 MRGPREQ86SM8 312 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 SLC9B2Q86UD5 537 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 APOBEC3FQ8IUX4 373 aaKnown RBP15.12■□□□□ 0.01
C9orf3-206ENST00000428313 FBXO16Q8IX29 292 aaPredicted RBP15.12■□□□□ 0.01
C9orf3-206ENST00000428313 OR14A16Q8NHC5 309 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 ZNF285Q96NJ3 590 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 UTP23Q9BRU9 249 aaKnown RBP15.12■□□□□ 0.01
C9orf3-206ENST00000428313 CRB3Q9BUF7 120 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 SPATC1LQ9H0A9 340 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 PIGMQ9H3S5 423 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 SDHAF3Q9NRP4 125 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 TAS2R5Q9NYW4 299 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 FLVCR2Q9UPI3 526 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 CAMK2AQ9UQM7 478 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 SLC9B1P1A6NJY1 282 aa15.11■□□□□ 0.01
C9orf3-206ENST00000428313 UPK3BL1B0FP48 263 aa15.11■□□□□ 0.01
C9orf3-206ENST00000428313 UPK3BL2E5RIL1 263 aa15.11■□□□□ 0.01
C9orf3-206ENST00000428313 INSIG1O15503 277 aa15.11■□□□□ 0.01
C9orf3-206ENST00000428313 SLC25A14O95258 325 aaPredicted RBP15.11■□□□□ 0.01
C9orf3-206ENST00000428313 CBSLP0DN79 551 aa15.11■□□□□ 0.01
C9orf3-206ENST00000428313 SYN1P17600 705 aa15.11■□□□□ 0.01
C9orf3-206ENST00000428313 MPGP29372 298 aa15.11■□□□□ 0.01
C9orf3-206ENST00000428313 CBSP35520 551 aa15.11■□□□□ 0.01
C9orf3-206ENST00000428313 MAPK9P45984 424 aa15.11■□□□□ 0.01
C9orf3-206ENST00000428313 SIM1P81133 766 aaPredicted RBP15.11■□□□□ 0.01
C9orf3-206ENST00000428313 CDC42EP1Q00587 391 aa15.11■□□□□ 0.01
C9orf3-206ENST00000428313 KRT33BQ14525 404 aa15.11■□□□□ 0.01
C9orf3-206ENST00000428313 FAM74A1Q5RGS3 127 aa15.11■□□□□ 0.01
C9orf3-206ENST00000428313 CIR1Q86X95 450 aaPredicted RBP15.11■□□□□ 0.01
C9orf3-206ENST00000428313 LINC00471Q8N535 108 aa15.11■□□□□ 0.01
C9orf3-206ENST00000428313 IGSF8Q969P0 613 aa15.11■□□□□ 0.01
C9orf3-206ENST00000428313 JAM3Q9BX67 310 aa15.11■□□□□ 0.01
C9orf3-206ENST00000428313 ENKD1Q9H0I2 346 aa15.11■□□□□ 0.01
C9orf3-206ENST00000428313 SEBOXQ9HB31 216 aaPredicted RBP15.11■□□□□ 0.01
C9orf3-206ENST00000428313 SLC22A11Q9NSA0 550 aa15.11■□□□□ 0.01
C9orf3-206ENST00000428313 ACAD8Q9UKU7 415 aa15.11■□□□□ 0.01
C9orf3-206ENST00000428313 MYO16Q9Y6X6 1858 aa15.11■□□□□ 0.01
C9orf3-206ENST00000428313 A0A0G2JK05 382 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 RAB19A4D1S5 217 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 DRGXA6NNA5 263 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 EFCAB7A8K855 629 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 GPR31O00270 319 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 LCMT2O60294 686 aaKnown RBP15.1■□□□□ 0.01
C9orf3-206ENST00000428313 IGHA1P01876 353 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 SERPIND1P05546 499 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 FBP1P09467 338 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 SELLP14151 372 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 PTAFRP25105 342 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 OPRD1P41143 372 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 CCR9P51686 369 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 NFATC2Q13469 925 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 TMEM44Q2T9K0 475 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 RNASE12Q5GAN4 147 aaKnown RBP15.1■□□□□ 0.01
C9orf3-206ENST00000428313 MARCH8Q5T0T0 291 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 GANCQ8TET4 914 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 SPRYD4Q8WW59 207 aaPredicted RBP15.1■□□□□ 0.01
C9orf3-206ENST00000428313 SMIM14Q96QK8 99 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 ZNF649Q9BS31 505 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 PAPOLGQ9BWT3 736 aaKnown RBP15.1■□□□□ 0.01
C9orf3-206ENST00000428313 UCK1Q9HA47 277 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 PLEKHA1Q9HB21 404 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 AKAP7Q9P0M2 348 aaPredicted RBP15.1■□□□□ 0.01
C9orf3-206ENST00000428313 ZNF69Q9UC07 566 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 MIOXQ9UGB7 285 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 OPN4Q9UHM6 478 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 PLEKHM1Q9Y4G2 1056 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 TIMM13Q9Y5L4 95 aaPredicted RBP15.1■□□□□ 0.01
C9orf3-206ENST00000428313 PPP2R3BQ9Y5P8 575 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 SLC22A7Q9Y694 548 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 CCDC88CQ9P219 2028 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 NME6O75414 186 aaPredicted RBP15.1■□□□□ 0.01
C9orf3-206ENST00000428313 CRYBA1P05813 215 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 HEXAP06865 529 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 RPA2P15927 270 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 IGFBP6P24592 240 aaPredicted RBP15.1■□□□□ 0.01
C9orf3-206ENST00000428313 GDNFP39905 211 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 SLC6A12P48065 614 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 PGFP49763 221 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 MECP2P51608 486 aaKnown RBP15.1■□□□□ 0.01
C9orf3-206ENST00000428313 CASP9P55211 416 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 ECH1Q13011 328 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 ZNF124Q15973 351 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 ATXN7L2Q5T6C5 722 aaPredicted RBP15.1■□□□□ 0.01
C9orf3-206ENST00000428313 PRAMEF13Q5VWM6 474 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 TCTN3Q6NUS6 607 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 ZFP3Q96NJ6 502 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 WRAP53Q9BUR4 548 aaKnown RBP15.1■□□□□ 0.01
C9orf3-206ENST00000428313 CPEB1Q9BZB8 566 aaKnown RBP15.1■□□□□ 0.01
C9orf3-206ENST00000428313 TM6SF2Q9BZW4 377 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 OR10A4Q9H209 315 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 ELAC1Q9H777 363 aaKnown RBP15.1■□□□□ 0.01
C9orf3-206ENST00000428313 ZFP57Q9NU63 452 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 ARL15Q9NXU5 204 aa15.1■□□□□ 0.01
C9orf3-206ENST00000428313 EXOGQ9Y2C4 368 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms