RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 FAM81AQ8TBF8 368 aa24.6■■□□□ 1.53
LDB1-202ENST00000425280 PMM1Q92871 262 aa24.6■■□□□ 1.53
LDB1-202ENST00000425280 POLR1BQ9H9Y6 1135 aa24.6■■□□□ 1.53
LDB1-202ENST00000425280 SEMA4GQ9NTN9 838 aa24.6■■□□□ 1.53
LDB1-202ENST00000425280 CEPT1Q9Y6K0 416 aa24.6■■□□□ 1.53
LDB1-202ENST00000425280 H3BSA7 217 aa24.6■■□□□ 1.53
LDB1-202ENST00000425280 ANKRD34CP0C6C1 535 aa24.6■■□□□ 1.53
LDB1-202ENST00000425280 NID1P14543 1247 aa24.6■■□□□ 1.53
LDB1-202ENST00000425280 CHMP24386 653 aa24.6■■□□□ 1.53
LDB1-202ENST00000425280 CRISP1P54107 249 aa24.6■■□□□ 1.53
LDB1-202ENST00000425280 PIGFQ07326 219 aa24.6■■□□□ 1.53
LDB1-202ENST00000425280 PTGES3Q15185 160 aaKnown RBP24.6■■□□□ 1.53
LDB1-202ENST00000425280 SMN1Q16637 294 aaKnown RBP24.6■■□□□ 1.53
LDB1-202ENST00000425280 ENTPD8Q5MY95 495 aa24.6■■□□□ 1.53
LDB1-202ENST00000425280 NPSR1Q6W5P4 371 aa24.6■■□□□ 1.53
LDB1-202ENST00000425280 ARHGAP22Q7Z5H3 698 aa24.6■■□□□ 1.53
LDB1-202ENST00000425280 OR4N2Q8NGD1 307 aa24.6■■□□□ 1.53
LDB1-202ENST00000425280 MCHR1Q99705 422 aa24.6■■□□□ 1.53
LDB1-202ENST00000425280 DPYSL5Q9BPU6 564 aa24.6■■□□□ 1.53
LDB1-202ENST00000425280 OR10A5Q9H207 317 aa24.6■■□□□ 1.53
LDB1-202ENST00000425280 A0A1B0GX78 115 aa24.59■■□□□ 1.53
LDB1-202ENST00000425280 PTGES3LE9PB15 166 aa24.59■■□□□ 1.53
LDB1-202ENST00000425280 AP3D1O14617 1153 aa24.59■■□□□ 1.53
LDB1-202ENST00000425280 CYP7B1O75881 506 aa24.59■■□□□ 1.53
LDB1-202ENST00000425280 CLPSP04118 112 aa24.59■■□□□ 1.53
LDB1-202ENST00000425280 TNNI3P19429 210 aa24.59■■□□□ 1.53
LDB1-202ENST00000425280 CNR2P34972 360 aa24.59■■□□□ 1.53
LDB1-202ENST00000425280 LSM11P83369 360 aaKnown RBP eCLIP24.59■■□□□ 1.532e-7■■■■□ 20.1
LDB1-202ENST00000425280 TARDBPQ13148 414 aaKnown RBP eCLIP24.59■■□□□ 1.537e-8■■■■□ 22.6
LDB1-202ENST00000425280 TRIM61Q5EBN2 209 aa24.59■■□□□ 1.53
LDB1-202ENST00000425280 C1orf189Q5VU69 101 aa24.59■■□□□ 1.53
LDB1-202ENST00000425280 RABEPKQ7Z6M1 372 aa24.59■■□□□ 1.53
LDB1-202ENST00000425280 LINC00471Q8N535 108 aa24.59■■□□□ 1.53
LDB1-202ENST00000425280 ZNF615Q8N8J6 731 aa24.59■■□□□ 1.53
LDB1-202ENST00000425280 OR4D9Q8NGE8 314 aa24.59■■□□□ 1.53
LDB1-202ENST00000425280 C16orf52Q8NHV5 167 aa24.59■■□□□ 1.53
LDB1-202ENST00000425280 LRRN3Q9H3W5 708 aa24.59■■□□□ 1.53
LDB1-202ENST00000425280 SLC6A14Q9UN76 642 aa24.59■■□□□ 1.53
LDB1-202ENST00000425280 MYO15AQ9UKN7 3530 aa24.59■■□□□ 1.53
LDB1-202ENST00000425280 OSMP13725 252 aa24.58■■□□□ 1.53
LDB1-202ENST00000425280 ZNF136P52737 540 aa24.58■■□□□ 1.53
LDB1-202ENST00000425280 PMS2P3Q13401 168 aa24.58■■□□□ 1.53
LDB1-202ENST00000425280 MRPL2Q5T653 305 aaKnown RBP24.58■■□□□ 1.53
LDB1-202ENST00000425280 MFSD4BQ5TF39 518 aa24.58■■□□□ 1.53
LDB1-202ENST00000425280 QSOX2Q6ZRP7 698 aa24.58■■□□□ 1.53
LDB1-202ENST00000425280 SPARTQ8N0X7 666 aa24.58■■□□□ 1.53
LDB1-202ENST00000425280 NAT6Q93015 286 aa24.58■■□□□ 1.53
LDB1-202ENST00000425280 TSLPQ969D9 159 aa24.58■■□□□ 1.53
LDB1-202ENST00000425280 FKBP10Q96AY3 582 aa24.58■■□□□ 1.53
LDB1-202ENST00000425280 IGKV3D-11A0A0A0MRZ8 115 aa24.58■■□□□ 1.53
LDB1-202ENST00000425280 CCDC160A6NGH7 325 aa24.58■■□□□ 1.53
LDB1-202ENST00000425280 ZAR1LA6NP61 321 aa24.58■■□□□ 1.53
LDB1-202ENST00000425280 C17orf105B2RV13 164 aa24.58■■□□□ 1.53
LDB1-202ENST00000425280 IGKV1D-16P01601 117 aa24.58■■□□□ 1.53
LDB1-202ENST00000425280 KRT20P35900 424 aa24.58■■□□□ 1.53
LDB1-202ENST00000425280 RFX3P48380 749 aa24.58■■□□□ 1.53
LDB1-202ENST00000425280 IDH2P48735 452 aaKnown RBP24.58■■□□□ 1.53
LDB1-202ENST00000425280 TRAM2Q15035 370 aa24.58■■□□□ 1.53
LDB1-202ENST00000425280 NEDD8Q15843 81 aa24.58■■□□□ 1.53
LDB1-202ENST00000425280 PLEKHM3Q6ZWE6 761 aa24.58■■□□□ 1.53
LDB1-202ENST00000425280 GPR141Q7Z602 305 aa24.58■■□□□ 1.53
LDB1-202ENST00000425280 ZER1Q7Z7L7 766 aa24.58■■□□□ 1.53
LDB1-202ENST00000425280 RCBTB1Q8NDN9 531 aa24.58■■□□□ 1.53
LDB1-202ENST00000425280 PTPMT1Q8WUK0 201 aaPredicted RBP24.58■■□□□ 1.53
LDB1-202ENST00000425280 NUP210LQ5VU65 1888 aa24.57■■□□□ 1.52
LDB1-202ENST00000425280 IGHV5-10-1A0A0J9YXX1 117 aa24.57■■□□□ 1.52
LDB1-202ENST00000425280 ARHGAP33O14559 1287 aa24.57■■□□□ 1.52
LDB1-202ENST00000425280 CER1O95813 267 aa24.57■■□□□ 1.52
LDB1-202ENST00000425280 GUSBP08236 651 aa24.57■■□□□ 1.52
LDB1-202ENST00000425280 MMP11P24347 488 aa24.57■■□□□ 1.52
LDB1-202ENST00000425280 RNF144AP50876 292 aaPredicted RBP24.57■■□□□ 1.52
LDB1-202ENST00000425280 ST3GAL3Q11203 375 aa24.57■■□□□ 1.52
LDB1-202ENST00000425280 ZBED5Q49AG3 693 aa24.57■■□□□ 1.52
LDB1-202ENST00000425280 MINDY4Q4G0A6 757 aa24.57■■□□□ 1.52
LDB1-202ENST00000425280 FLYWCH1Q4VC44 716 aa24.57■■□□□ 1.52
LDB1-202ENST00000425280 TMEM236Q5W0B7 351 aa24.57■■□□□ 1.52
LDB1-202ENST00000425280 SLC23A3Q6PIS1 610 aa24.57■■□□□ 1.52
LDB1-202ENST00000425280 RHOXF1Q8NHV9 184 aa24.57■■□□□ 1.52
LDB1-202ENST00000425280 SLC38A4Q969I6 547 aa24.57■■□□□ 1.52
LDB1-202ENST00000425280 PNO1Q9NRX1 252 aaKnown RBP24.57■■□□□ 1.52
LDB1-202ENST00000425280 A0A087WUU8 490 aa24.57■■□□□ 1.52
LDB1-202ENST00000425280 ILKQ13418 452 aa24.57■■□□□ 1.52
LDB1-202ENST00000425280 ARHGAP40Q5TG30 622 aa24.57■■□□□ 1.52
LDB1-202ENST00000425280 POLR2J3Q9H1A7 115 aaKnown RBP24.57■■□□□ 1.52
LDB1-202ENST00000425280 ANKRD19PQ9H560 264 aa24.57■■□□□ 1.52
LDB1-202ENST00000425280 SYNDIG1Q9H7V2 258 aa24.57■■□□□ 1.52
LDB1-202ENST00000425280 ZNF226Q9NYT6 803 aa24.57■■□□□ 1.52
LDB1-202ENST00000425280 TPRKBQ9Y3C4 175 aa24.57■■□□□ 1.52
LDB1-202ENST00000425280 CDHR4A6H8M9 788 aa24.56■■□□□ 1.52
LDB1-202ENST00000425280 THY1P04216 161 aa24.56■■□□□ 1.52
LDB1-202ENST00000425280 CT45A8P0DMV1 189 aa24.56■■□□□ 1.52
LDB1-202ENST00000425280 CT45A9P0DMV2 189 aa24.56■■□□□ 1.52
LDB1-202ENST00000425280 JUNBP17275 347 aaPredicted RBP24.56■■□□□ 1.52
LDB1-202ENST00000425280 POU1F1P28069 291 aa24.56■■□□□ 1.52
LDB1-202ENST00000425280 IFNA8P32881 189 aa24.56■■□□□ 1.52
LDB1-202ENST00000425280 EFNA3P52797 238 aa24.56■■□□□ 1.52
LDB1-202ENST00000425280 RHAGQ02094 409 aa24.56■■□□□ 1.52
LDB1-202ENST00000425280 CT45A2Q5DJT8 189 aa24.56■■□□□ 1.52
LDB1-202ENST00000425280 VWA2Q5GFL6 755 aa24.56■■□□□ 1.52
LDB1-202ENST00000425280 XAF1Q6GPH4 301 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms