RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 CXCL13O43927 109 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 VSIG8P0DPA2 414 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 DDX5P17844 614 aaKnown RBP7.89□□□□□ -1.15
TRIM39-206ENST00000420746 PGCP20142 388 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 NT5EP21589 574 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 PRTN3P24158 256 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 IL12BP29460 328 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 EVI2BP34910 448 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 KRT20P35900 424 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 GDF5P43026 501 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 OR3A2P47893 321 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 PPOXP50336 477 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 BASP1P80723 227 aaKnown RBP7.89□□□□□ -1.15
TRIM39-206ENST00000420746 RIN1Q13671 783 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 TSNAXIP1Q2TAA8 658 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 ARL13AQ5H913 290 aaPredicted RBP7.89□□□□□ -1.15
TRIM39-206ENST00000420746 THSD4Q6ZMP0 1018 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 Q6ZPA2 131 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 C1orf229Q6ZS94 237 aaPredicted RBP7.89□□□□□ -1.15
TRIM39-206ENST00000420746 REC114Q7Z4M0 266 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 TUSC5Q8IXB3 177 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 LAS2Q8IYD9 372 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 ZNF786Q8N393 782 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 BPIFB2Q8N4F0 458 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 NKAPQ8N5F7 415 aaKnown RBP7.89□□□□□ -1.15
TRIM39-206ENST00000420746 C2CD4AQ8NCU7 369 aaPredicted RBP7.89□□□□□ -1.15
TRIM39-206ENST00000420746 OR5M1Q8NGP8 315 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 OR2W6PQ8NHA6 318 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 OR2V1Q8NHB1 315 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 FBXO17Q96EF6 278 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 LRRC37BQ96QE4 947 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 SORBS1Q9BX66 1292 aaKnown RBP7.89□□□□□ -1.15
TRIM39-206ENST00000420746 SAYSD1Q9NPB0 183 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 SMYD2Q9NRG4 433 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 IARS2Q9NSE4 1012 aaKnown RBP7.89□□□□□ -1.15
TRIM39-206ENST00000420746 ABHD10Q9NUJ1 306 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 MED11Q9P086 117 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 GPR55Q9Y2T6 319 aaPredicted RBP7.89□□□□□ -1.15
TRIM39-206ENST00000420746 MMP24Q9Y5R2 645 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 SLC25A15Q9Y619 301 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 ATP23Q9Y6H3 246 aa7.89□□□□□ -1.15
TRIM39-206ENST00000420746 ARFGEF3Q5TH69 2177 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 IGLV3-32A0A0A0MS00 114 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 A0A0A6YYD5 115 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 TRAV20A0A0B4J274 112 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 A0A1W2PS29 197 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 TCRBV7S2A1N4TA0A589 114 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 C7orf72A4D263 438 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 ESPNB1AK53 854 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 PLPP1O14494 284 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 SCAMP2O15127 329 aaKnown RBP7.88□□□□□ -1.15
TRIM39-206ENST00000420746 TMPRSS11DO60235 418 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 PDE5AO76074 875 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 NTN1O95631 604 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 TGFB1P01137 390 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 TFP02787 698 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 ATP1B1P05026 303 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 YES1P07947 543 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 CCDC175P0C221 793 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 FAM58BPP0C7Q3 252 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 CPMP14384 443 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 DAOP14920 347 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 EPB42P16452 691 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 GGT5P36269 586 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 MAGEA1P43355 309 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 EMDP50402 254 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 IDH3GP51553 393 aaPredicted RBP7.88□□□□□ -1.15
TRIM39-206ENST00000420746 RAP1GDS1P52306 607 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 RAC1P63000 192 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 SARNPP82979 210 aaKnown RBP7.88□□□□□ -1.15
TRIM39-206ENST00000420746 RASGEF1BQ0VAM2 473 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 MGAT2Q10469 447 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 ZNF239Q16600 458 aaKnown RBP7.88□□□□□ -1.15
TRIM39-206ENST00000420746 TUSC1Q2TAM9 212 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 PRICKLE4Q2TBC4 344 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 SH2D4BQ5SQS7 431 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 RBM20Q5T481 1227 aaKnown RBP7.88□□□□□ -1.15
TRIM39-206ENST00000420746 C1QTNF12Q5T7M4 302 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 LARP4Q71RC2 724 aaKnown RBP eCLIP7.88□□□□□ -1.15
TRIM39-206ENST00000420746 SLC46A3Q7Z3Q1 461 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 GALNT7Q86SF2 657 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 PRUNE1Q86TP1 453 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 TCAIMQ8N3R3 496 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 ANKS4BQ8N8V4 417 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 OR4K14Q8NGD5 310 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 OR51F2Q8NH61 342 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 ABHD3Q8WU67 409 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 NEU4Q8WWR8 484 aaPredicted RBP7.88□□□□□ -1.15
TRIM39-206ENST00000420746 CPNE4Q96A23 557 aaPredicted RBP7.88□□□□□ -1.15
TRIM39-206ENST00000420746 ZBTB8AQ96BR9 441 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 REXO5Q96IC2 774 aaKnown RBP7.88□□□□□ -1.15
TRIM39-206ENST00000420746 VRK1Q99986 396 aaPredicted RBP7.88□□□□□ -1.15
TRIM39-206ENST00000420746 ZNF717Q9BY31 904 aaPredicted RBP7.88□□□□□ -1.15
TRIM39-206ENST00000420746 RAB1BQ9H0U4 201 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 OR51B5Q9H339 312 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 DDX31Q9H8H2 851 aaKnown RBP7.88□□□□□ -1.15
TRIM39-206ENST00000420746 CNOT10Q9H9A5 744 aaKnown RBP7.88□□□□□ -1.15
TRIM39-206ENST00000420746 C20orf96Q9NUD7 363 aaPredicted RBP7.88□□□□□ -1.15
TRIM39-206ENST00000420746 BCAP29Q9UHQ4 241 aa7.88□□□□□ -1.15
TRIM39-206ENST00000420746 PLLPQ9Y342 182 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms