RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 KRT74Q7RTS7 529 aa12.98□□□□□ -0.33
CHEK2-210ENST00000416671 OR4N4Q8N0Y3 316 aa12.98□□□□□ -0.33
CHEK2-210ENST00000416671 OR8D1Q8WZ84 308 aa12.98□□□□□ -0.33
CHEK2-210ENST00000416671 FGF13Q92913 245 aa12.98□□□□□ -0.33
CHEK2-210ENST00000416671 LINC00052Q96N35 136 aa12.98□□□□□ -0.33
CHEK2-210ENST00000416671 REEP4Q9H6H4 257 aa12.98□□□□□ -0.33
CHEK2-210ENST00000416671 IMP3Q9NV31 184 aaKnown RBP12.98□□□□□ -0.33
CHEK2-210ENST00000416671 KCMF1Q9P0J7 381 aa12.98□□□□□ -0.33
CHEK2-210ENST00000416671 SLC27A6Q9Y2P4 619 aa12.98□□□□□ -0.33
CHEK2-210ENST00000416671 EXOSC1Q9Y3B2 195 aaKnown RBP12.98□□□□□ -0.33
CHEK2-210ENST00000416671 GOLGA4Q13439 2230 aaKnown RBP12.98□□□□□ -0.33
CHEK2-210ENST00000416671 TBC1D3BA6NDS4 549 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 H0YIV9 168 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 M0R233 179 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 TGFB1P01137 390 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 TP53P04637 393 aaPredicted RBP12.97□□□□□ -0.33
CHEK2-210ENST00000416671 GAAP10253 952 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 KELP23276 732 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 TIA1P31483 386 aaKnown RBP eCLIP12.97□□□□□ -0.33
CHEK2-210ENST00000416671 SOX18P35713 384 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 RPL6Q02878 288 aaKnown RBP12.97□□□□□ -0.33
CHEK2-210ENST00000416671 EIF2B5Q13144 721 aaKnown RBP12.97□□□□□ -0.33
CHEK2-210ENST00000416671 GINS1Q14691 196 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 RTL10Q7L3V2 364 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 SLC30A8Q8IWU4 369 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 ARIH2OSQ8N7S6 290 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 WFIKKN2Q8TEU8 576 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 APOBEC4Q8WW27 367 aaKnown RBP12.97□□□□□ -0.33
CHEK2-210ENST00000416671 CIDECQ96AQ7 238 aaPredicted RBP12.97□□□□□ -0.33
CHEK2-210ENST00000416671 ASB16Q96NS5 453 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 UBL7Q96S82 380 aaPredicted RBP12.97□□□□□ -0.33
CHEK2-210ENST00000416671 MRPS18AQ9NVS2 196 aaKnown RBP12.97□□□□□ -0.33
CHEK2-210ENST00000416671 KIF25Q9UIL4 384 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 SESN1Q9Y6P5 492 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 MEIKINA0A087WXM9 373 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 TCRBP04435 133 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 SYPP08247 313 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 NPPBP16860 134 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 SOAT1P35610 550 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 DSTNP60981 165 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 CRYZQ08257 329 aaKnown RBP12.97□□□□□ -0.33
CHEK2-210ENST00000416671 ZNF658BQ4V348 819 aaPredicted RBP12.97□□□□□ -0.33
CHEK2-210ENST00000416671 IDNKQ5T6J7 187 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 REEP3Q6NUK4 255 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 ACSM5Q6NUN0 579 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 TCTN3Q6NUS6 607 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 FAM180BQ6P0A1 224 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 SLCO4C1Q6ZQN7 724 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 FAM83HQ6ZRV2 1179 aaPredicted RBP12.97□□□□□ -0.33
CHEK2-210ENST00000416671 PIAS4Q8N2W9 510 aaPredicted RBP12.97□□□□□ -0.33
CHEK2-210ENST00000416671 ZNF740Q8NDX6 193 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 DACT3Q96B18 629 aaPredicted RBP12.97□□□□□ -0.33
CHEK2-210ENST00000416671 FAM83CQ9BQN1 747 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 CDCP1Q9H5V8 836 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 DLL4Q9NR61 685 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 SDHAF2Q9NX18 166 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 SCP2D1Q9UJQ7 156 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 CSNK1G3Q9Y6M4 447 aa12.97□□□□□ -0.33
CHEK2-210ENST00000416671 C2orf92A0A1B0GVN3 265 aa12.96□□□□□ -0.33
CHEK2-210ENST00000416671 GPR171O14626 319 aa12.96□□□□□ -0.33
CHEK2-210ENST00000416671 CASC3O15234 703 aaKnown RBP12.96□□□□□ -0.33
CHEK2-210ENST00000416671 EEF1E1O43324 174 aaKnown RBP12.96□□□□□ -0.33
CHEK2-210ENST00000416671 POP7O75817 140 aaKnown RBP12.96□□□□□ -0.33
CHEK2-210ENST00000416671 LIMS3P0CW19 117 aa12.96□□□□□ -0.33
CHEK2-210ENST00000416671 LIMS4P0CW20 117 aa12.96□□□□□ -0.33
CHEK2-210ENST00000416671 TFPIP10646 304 aa12.96□□□□□ -0.33
CHEK2-210ENST00000416671 CD79BP40259 229 aa12.96□□□□□ -0.33
CHEK2-210ENST00000416671 OPRD1P41143 372 aa12.96□□□□□ -0.33
CHEK2-210ENST00000416671 GIPRP48546 466 aa12.96□□□□□ -0.33
CHEK2-210ENST00000416671 C2orf80Q0P641 193 aa12.96□□□□□ -0.33
CHEK2-210ENST00000416671 SLBPQ14493 270 aaKnown RBP eCLIP12.96□□□□□ -0.33
CHEK2-210ENST00000416671 ELAVL3Q14576 367 aaKnown RBP12.96□□□□□ -0.33
CHEK2-210ENST00000416671 TUSC1Q2TAM9 212 aa12.96□□□□□ -0.33
CHEK2-210ENST00000416671 DEF8Q6ZN54 512 aa12.96□□□□□ -0.33
CHEK2-210ENST00000416671 LRRC28Q86X40 367 aaPredicted RBP12.96□□□□□ -0.33
CHEK2-210ENST00000416671 NRSN1Q8IZ57 195 aa12.96□□□□□ -0.33
CHEK2-210ENST00000416671 OR52H1Q8NGJ2 320 aa12.96□□□□□ -0.33
CHEK2-210ENST00000416671 OR6M1Q8NGM8 313 aa12.96□□□□□ -0.33
CHEK2-210ENST00000416671 OR5M3Q8NGP4 307 aa12.96□□□□□ -0.33
CHEK2-210ENST00000416671 MARC2Q969Z3 335 aa12.96□□□□□ -0.33
CHEK2-210ENST00000416671 SGTBQ96EQ0 304 aa12.96□□□□□ -0.33
CHEK2-210ENST00000416671 ERMAPQ96PL5 475 aaPredicted RBP12.96□□□□□ -0.33
CHEK2-210ENST00000416671 SHARPINQ9H0F6 387 aa12.96□□□□□ -0.33
CHEK2-210ENST00000416671 OR51B5Q9H339 312 aa12.96□□□□□ -0.33
CHEK2-210ENST00000416671 CYSLTR2Q9NS75 346 aa12.96□□□□□ -0.33
CHEK2-210ENST00000416671 TM7SF3Q9NS93 570 aa12.96□□□□□ -0.33
CHEK2-210ENST00000416671 KCNMB2Q9Y691 235 aa12.96□□□□□ -0.33
CHEK2-210ENST00000416671 NUMA1Q14980 2115 aa12.96□□□□□ -0.33
CHEK2-210ENST00000416671 CD8B2A6NJW9 211 aa12.96□□□□□ -0.34
CHEK2-210ENST00000416671 PRODHO43272 600 aa12.96□□□□□ -0.34
CHEK2-210ENST00000416671 GPR37L1O60883 481 aa12.96□□□□□ -0.34
CHEK2-210ENST00000416671 SEMA7AO75326 666 aa12.96□□□□□ -0.34
CHEK2-210ENST00000416671 NME6O75414 186 aaPredicted RBP12.96□□□□□ -0.34
CHEK2-210ENST00000416671 EPHX1P07099 455 aa12.96□□□□□ -0.34
CHEK2-210ENST00000416671 CD8BP10966 210 aa12.96□□□□□ -0.34
CHEK2-210ENST00000416671 CELP19835 753 aa12.96□□□□□ -0.34
CHEK2-210ENST00000416671 MTNR1AP48039 350 aa12.96□□□□□ -0.34
CHEK2-210ENST00000416671 TPMTP51580 245 aa12.96□□□□□ -0.34
CHEK2-210ENST00000416671 VSX2P58304 361 aaPredicted RBP12.96□□□□□ -0.34
CHEK2-210ENST00000416671 MC1RQ01726 317 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms