RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 FBXO25Q8TCJ0 367 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 MITD1Q8WV92 249 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 DLX4Q92988 240 aaPredicted RBP4.27□□□□□ -1.73
LSM5-205ENST00000409952 ART4Q93070 314 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 C18orf25Q96B23 403 aaPredicted RBP4.27□□□□□ -1.73
LSM5-205ENST00000409952 TMIGD2Q96BF3 282 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 SGK3Q96BR1 496 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 EFHD2Q96C19 240 aaPredicted RBP4.27□□□□□ -1.73
LSM5-205ENST00000409952 ZNF778Q96MU6 729 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 SLC38A2Q96QD8 506 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 MTMR9Q96QG7 549 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 PSD2Q9BQI7 771 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 FEM1AQ9BSK4 669 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 PAPOLGQ9BWT3 736 aaKnown RBP4.27□□□□□ -1.73
LSM5-205ENST00000409952 COMMD4Q9H0A8 199 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 NRN1Q9NPD7 142 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 POT1Q9NUX5 634 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 DUS2Q9NX74 493 aaKnown RBP4.27□□□□□ -1.73
LSM5-205ENST00000409952 MRPL39Q9NYK5 338 aaKnown RBP4.27□□□□□ -1.73
LSM5-205ENST00000409952 CYTH4Q9UIA0 394 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 CSDC2Q9Y534 153 aaKnown RBP4.27□□□□□ -1.73
LSM5-205ENST00000409952 RNF215Q9Y6U7 377 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 LOC100506127A0A0U1RQW1 187 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 SMCO3A2RU48 225 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 ZNF840PA6NDX5 716 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 SRRM3A6NNA2 597 aaPredicted RBP4.26□□□□□ -1.73
LSM5-205ENST00000409952 GABRR3A8MPY1 467 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 HAS3O00219 553 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 EI24O14681 340 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 CASKO14936 926 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 YKT6O15498 198 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 SRPX2O60687 465 aaPredicted RBP4.26□□□□□ -1.73
LSM5-205ENST00000409952 LRATO95237 230 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 HOXC6P09630 235 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 H2BFMP0C1H6 154 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 FRMD6-AS1P0C7T7 363 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 IGHV4-38-2P0DP08 117 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 SLC2A2P11168 524 aaPredicted RBP4.26□□□□□ -1.73
LSM5-205ENST00000409952 ATP1B2P14415 290 aaPredicted RBP4.26□□□□□ -1.73
LSM5-205ENST00000409952 ZNF12P17014 697 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 RPL35AP18077 110 aaKnown RBP4.26□□□□□ -1.73
LSM5-205ENST00000409952 SRMP19623 302 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 AOC1P19801 751 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 C4BPBP20851 252 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 MMP11P24347 488 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 U2AF2P26368 475 aaKnown RBP eCLIP4.26□□□□□ -1.73
LSM5-205ENST00000409952 CRYBB2P43320 205 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 P2RY1P47900 373 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 SLC7A2P52569 658 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 NTHL1P78549 312 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 OGDHQ02218 1023 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 C1orf61Q13536 156 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 Q3ZCU0 254 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 SBK1Q52WX2 424 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 MORN5Q5VZ52 161 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 ZNF626Q68DY1 528 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 PNCKQ6P2M8 343 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 TMEM220Q6QAJ8 160 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 UNQ6126/PRO20091Q6UXV3 157 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 SSX9Q7RTT3 188 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 VTCN1Q7Z7D3 282 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 TBC1D10CQ8IV04 446 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 MICU2Q8IYU8 434 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 CLEC4FQ8N1N0 589 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 CSGALNACT2Q8N6G5 542 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 POC1AQ8NBT0 407 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 DMBX1Q8NFW5 382 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 OR4F17Q8NGA8 305 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 OR4K14Q8NGD5 310 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 OR4F5Q8NH21 305 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 GPX8Q8TED1 209 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 KIAA1143Q96AT1 154 aaPredicted RBP4.26□□□□□ -1.73
LSM5-205ENST00000409952 ZNF707Q96C28 371 aaPredicted RBP4.26□□□□□ -1.73
LSM5-205ENST00000409952 NRBF2Q96F24 287 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 HMCESQ96FZ2 354 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 NSMCE3Q96MG7 304 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 DUX5Q96PT3 197 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 OR4F4Q96R69 305 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 SLC7A5P2Q9GIP4 190 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 IL25Q9H293 177 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 EBF2Q9HAK2 575 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 DCAF13Q9NV06 445 aaKnown RBP4.26□□□□□ -1.73
LSM5-205ENST00000409952 PSMC3IPQ9P2W1 217 aaPredicted RBP4.26□□□□□ -1.73
LSM5-205ENST00000409952 VANGL2Q9ULK5 521 aa4.26□□□□□ -1.73
LSM5-205ENST00000409952 A0A0A6YYD4 124 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 LY6G6EA0A0G2JKS1 128 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 A0A0J9YYE9 177 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 A0A1W2PPE3 182 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 WDR91A4D1P6 747 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 LRP5LA4QPB2 252 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 OR5H15A6NDH6 313 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 FRG2CA6NGY1 282 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 HSBP1L1C9JCN9 74 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 PRR23D1E9PI22 279 aaPredicted RBP4.25□□□□□ -1.73
LSM5-205ENST00000409952 K7ERQ8 282 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 CYB561D2O14569 222 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 TAPBPO15533 448 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 E2F6O75461 281 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 H6PDO95479 791 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 CAVIN2O95810 425 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms