RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 PIGQQ9BRB3 760 aa13.33□□□□□ -0.27
CBX3-203ENST00000409747 TBL1XR1Q9BZK7 514 aa13.33□□□□□ -0.27
CBX3-203ENST00000409747 NDRG3Q9UGV2 375 aa13.33□□□□□ -0.27
CBX3-203ENST00000409747 TMED5Q9Y3A6 229 aa13.33□□□□□ -0.27
CBX3-203ENST00000409747 CCL27Q9Y4X3 112 aa13.33□□□□□ -0.27
CBX3-203ENST00000409747 MED12Q93074 2177 aa13.33□□□□□ -0.28
CBX3-203ENST00000409747 MAP1AP78559 2803 aaPredicted RBP13.33□□□□□ -0.28
CBX3-203ENST00000409747 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.33□□□□□ -0.28
CBX3-203ENST00000409747 A0A1W2PNV4 684 aa13.33□□□□□ -0.28
CBX3-203ENST00000409747 SH3D21A4FU49 640 aa13.33□□□□□ -0.28
CBX3-203ENST00000409747 MSTNO14793 375 aa13.33□□□□□ -0.28
CBX3-203ENST00000409747 AZIN1O14977 448 aa13.33□□□□□ -0.28
CBX3-203ENST00000409747 TNFSF13O75888 250 aa13.33□□□□□ -0.28
CBX3-203ENST00000409747 PRPS2P11908 318 aa13.33□□□□□ -0.28
CBX3-203ENST00000409747 RFX3P48380 749 aa13.33□□□□□ -0.28
CBX3-203ENST00000409747 C17orf67Q0P5P2 114 aa13.33□□□□□ -0.28
CBX3-203ENST00000409747 HSPB3Q12988 150 aa13.33□□□□□ -0.28
CBX3-203ENST00000409747 FGFBP1Q14512 234 aa13.33□□□□□ -0.28
CBX3-203ENST00000409747 KIAA0040Q15053 153 aa13.33□□□□□ -0.28
CBX3-203ENST00000409747 GLYR1Q49A26 553 aaPredicted RBP13.33□□□□□ -0.28
CBX3-203ENST00000409747 CLEC6AQ6EIG7 209 aa13.33□□□□□ -0.28
CBX3-203ENST00000409747 UBQLNLQ8IYU4 475 aa13.33□□□□□ -0.28
CBX3-203ENST00000409747 CEP70Q8NHQ1 597 aa13.33□□□□□ -0.28
CBX3-203ENST00000409747 PPCDCQ96CD2 204 aa13.33□□□□□ -0.28
CBX3-203ENST00000409747 TMUB1Q9BVT8 246 aa13.33□□□□□ -0.28
CBX3-203ENST00000409747 TNFRSF12AQ9NP84 129 aa13.33□□□□□ -0.28
CBX3-203ENST00000409747 MED11Q9P086 117 aa13.33□□□□□ -0.28
CBX3-203ENST00000409747 STOML1Q9UBI4 398 aa13.33□□□□□ -0.28
CBX3-203ENST00000409747 NF1P21359 2839 aa13.32□□□□□ -0.28
CBX3-203ENST00000409747 A8MXE2 369 aa13.32□□□□□ -0.28
CBX3-203ENST00000409747 B4DXG7 233 aa13.32□□□□□ -0.28
CBX3-203ENST00000409747 CASKO14936 926 aa13.32□□□□□ -0.28
CBX3-203ENST00000409747 TBX19O60806 448 aa13.32□□□□□ -0.28
CBX3-203ENST00000409747 TGM6O95932 706 aa13.32□□□□□ -0.28
CBX3-203ENST00000409747 GABRA3P34903 492 aa13.32□□□□□ -0.28
CBX3-203ENST00000409747 CPOXP36551 454 aa13.32□□□□□ -0.28
CBX3-203ENST00000409747 PCYT1AP49585 367 aa13.32□□□□□ -0.28
CBX3-203ENST00000409747 OCRLQ01968 901 aa13.32□□□□□ -0.28
CBX3-203ENST00000409747 SLC18A2Q05940 514 aa13.32□□□□□ -0.28
CBX3-203ENST00000409747 KEAP1Q14145 624 aa13.32□□□□□ -0.28
CBX3-203ENST00000409747 C10orf107Q8IVU9 208 aa13.32□□□□□ -0.28
CBX3-203ENST00000409747 C4orf33Q8N1A6 199 aa13.32□□□□□ -0.28
CBX3-203ENST00000409747 CDRT4Q8N9R6 151 aa13.32□□□□□ -0.28
CBX3-203ENST00000409747 EPS8L3Q8TE67 593 aaKnown RBP13.32□□□□□ -0.28
CBX3-203ENST00000409747 SMPDL3BQ92485 455 aa13.32□□□□□ -0.28
CBX3-203ENST00000409747 C1GALT1C1Q96EU7 318 aa13.32□□□□□ -0.28
CBX3-203ENST00000409747 EGLN2Q96KS0 407 aa13.32□□□□□ -0.28
CBX3-203ENST00000409747 FCRL1Q96LA6 429 aa13.32□□□□□ -0.28
CBX3-203ENST00000409747 REEP4Q9H6H4 257 aa13.32□□□□□ -0.28
CBX3-203ENST00000409747 EQTNQ9NQ60 294 aa13.32□□□□□ -0.28
CBX3-203ENST00000409747 ZNF175Q9Y473 711 aa13.32□□□□□ -0.28
CBX3-203ENST00000409747 ZFHX3Q15911 3703 aa13.31□□□□□ -0.28
CBX3-203ENST00000409747 MED12LQ86YW9 2145 aa13.31□□□□□ -0.28
CBX3-203ENST00000409747 IGLV3-32A0A0A0MS00 114 aa13.31□□□□□ -0.28
CBX3-203ENST00000409747 TRIM13O60858 407 aa13.31□□□□□ -0.28
CBX3-203ENST00000409747 TNFRSF21O75509 655 aa13.31□□□□□ -0.28
CBX3-203ENST00000409747 UTS2O95399 124 aa13.31□□□□□ -0.28
CBX3-203ENST00000409747 FCGR2AP12318 317 aa13.31□□□□□ -0.28
CBX3-203ENST00000409747 ASMTP46597 345 aa13.31□□□□□ -0.28
CBX3-203ENST00000409747 RPS3AP61247 264 aaKnown RBP13.31□□□□□ -0.28
CBX3-203ENST00000409747 RPL38P63173 70 aaKnown RBP13.31□□□□□ -0.28
CBX3-203ENST00000409747 PRR5P85299 388 aa13.31□□□□□ -0.28
CBX3-203ENST00000409747 PLXDC2Q6UX71 529 aa13.31□□□□□ -0.28
CBX3-203ENST00000409747 ZNF551Q7Z340 670 aaPredicted RBP13.31□□□□□ -0.28
CBX3-203ENST00000409747 CNEP1R1Q8N9A8 125 aa13.31□□□□□ -0.28
CBX3-203ENST00000409747 GPR151Q8TDV0 419 aa13.31□□□□□ -0.28
CBX3-203ENST00000409747 DUSP19Q8WTR2 217 aa13.31□□□□□ -0.28
CBX3-203ENST00000409747 GFM2Q969S9 779 aaKnown RBP13.31□□□□□ -0.28
CBX3-203ENST00000409747 MS4A4EQ96PG1 132 aa13.31□□□□□ -0.28
CBX3-203ENST00000409747 ACSS1Q9NUB1 689 aaPredicted RBP13.31□□□□□ -0.28
CBX3-203ENST00000409747 MKS1Q9NXB0 559 aa13.31□□□□□ -0.28
CBX3-203ENST00000409747 FLRT3Q9NZU0 649 aa13.31□□□□□ -0.28
CBX3-203ENST00000409747 EIF3LQ9Y262 564 aaKnown RBP13.31□□□□□ -0.28
CBX3-203ENST00000409747 FIS1Q9Y3D6 152 aa13.31□□□□□ -0.28
CBX3-203ENST00000409747 AP4B1Q9Y6B7 739 aa13.31□□□□□ -0.28
CBX3-203ENST00000409747 SETD2Q9BYW2 2564 aaPredicted RBP13.31□□□□□ -0.28
CBX3-203ENST00000409747 OR2M5A3KFT3 312 aa13.3□□□□□ -0.28
CBX3-203ENST00000409747 C17orf51A8MQB3 221 aa13.3□□□□□ -0.28
CBX3-203ENST00000409747 H3BML4 177 aa13.3□□□□□ -0.28
CBX3-203ENST00000409747 SEC14L5O43304 696 aa13.3□□□□□ -0.28
CBX3-203ENST00000409747 SMNDC1O75940 238 aaKnown RBP eCLIP13.3□□□□□ -0.28
CBX3-203ENST00000409747 ATE1O95260 518 aa13.3□□□□□ -0.28
CBX3-203ENST00000409747 ANGPTL1O95841 491 aa13.3□□□□□ -0.28
CBX3-203ENST00000409747 HRGP04196 525 aa13.3□□□□□ -0.28
CBX3-203ENST00000409747 SDC1P18827 310 aa13.3□□□□□ -0.28
CBX3-203ENST00000409747 KLK2P20151 261 aa13.3□□□□□ -0.28
CBX3-203ENST00000409747 MANFP55145 182 aaKnown RBP13.3□□□□□ -0.28
CBX3-203ENST00000409747 PCLAFQ15004 111 aa13.3□□□□□ -0.28
CBX3-203ENST00000409747 KANK2Q63ZY3 851 aa13.3□□□□□ -0.28
CBX3-203ENST00000409747 R3HCC1LQ7Z5L2 792 aaKnown RBP13.3□□□□□ -0.28
CBX3-203ENST00000409747 MARCH3Q86UD3 253 aa13.3□□□□□ -0.28
CBX3-203ENST00000409747 RIBC1Q8N443 379 aaPredicted RBP13.3□□□□□ -0.28
CBX3-203ENST00000409747 HOXB13Q92826 284 aaPredicted RBP13.3□□□□□ -0.28
CBX3-203ENST00000409747 CIDECQ96AQ7 238 aaPredicted RBP13.3□□□□□ -0.28
CBX3-203ENST00000409747 MTERF3Q96E29 417 aa13.3□□□□□ -0.28
CBX3-203ENST00000409747 APOPT1Q96IL0 206 aa13.3□□□□□ -0.28
CBX3-203ENST00000409747 GATA5Q9BWX5 397 aaPredicted RBP13.3□□□□□ -0.28
CBX3-203ENST00000409747 PINK1Q9BXM7 581 aa13.3□□□□□ -0.28
CBX3-203ENST00000409747 C12orf65Q9H3J6 166 aaKnown RBP13.3□□□□□ -0.28
CBX3-203ENST00000409747 EML4Q9HC35 981 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms