RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 EMC8O43402 210 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 TYROBPO43914 113 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 NKX2-2O95096 273 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 CRHP06850 196 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 BCKDHAP12694 445 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 GABRA3P34903 492 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 HPCAL1P37235 193 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 KIR2DL3P43628 341 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 SERPINB4P48594 390 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 PCYT1AP49585 367 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 RPL38P63173 70 aaKnown RBP13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 MYBPHQ13203 477 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 SH2D4BQ5SQS7 431 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 POMZP3Q6PJE2 187 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 ZNF551Q7Z340 670 aaPredicted RBP13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 FADS6Q8N9I5 356 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 OR2T11Q8NH01 316 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 GPR151Q8TDV0 419 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 FAM222BQ8WU58 562 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 SFXN2Q96NB2 322 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 TSSK3Q96PN8 268 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 G6PC3Q9BUM1 346 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 SFXN3Q9BWM7 321 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 SLC17A7Q9P2U7 560 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 FBXL2Q9UKC9 423 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 FIS1Q9Y3D6 152 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 L3MBTL1Q9Y468 752 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 NCKAP5O14513 1909 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 OTOGQ6ZRI0 2925 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 FREM3P0C091 2139 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 IGLV3-32A0A0A0MS00 114 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 PIP5K1BO14986 540 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 TM9SF1O15321 606 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 RGS16O15492 202 aaPredicted RBP13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 SPAG7O75391 227 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 ZWINTO95229 277 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 CHRNGP07510 517 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 ZNF708P17019 499 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 PRPS1L1P21108 318 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 ETV4P43268 484 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 LHX2P50458 406 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 ZNF136P52737 540 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 SORDQ00796 357 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 HSPB3Q12988 150 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 LSM12Q3MHD2 195 aaKnown RBP13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 GALNTL6Q49A17 601 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 XKR7Q5GH72 579 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 OR2A2Q6IF42 318 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 NUDCD3Q8IVD9 361 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 MISPQ8IVT2 679 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 NAXEQ8NCW5 288 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 NUP43Q8NFH3 380 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 FAM110BQ8TC76 370 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 DUSP19Q8WTR2 217 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 GFM2Q969S9 779 aaKnown RBP13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 MS4A4EQ96PG1 132 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 SH3GL2Q99962 352 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 PIGQQ9BRB3 760 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 PARD6BQ9BYG5 372 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 TBL1XR1Q9BZK7 514 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 PIGMQ9H3S5 423 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 JKAMPQ9P055 326 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 BAIAP2L1Q9UHR4 511 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 EIF3LQ9Y262 564 aaKnown RBP13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 ARHGAP21Q5T5U3 1957 aa13.18□□□□□ -0.3
NIF3L1-205ENST00000409588 INTS1Q8N201 2190 aaKnown RBP13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 A0A087WZY1 265 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 AKAP10O43572 662 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 TNFRSF21O75509 655 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 KRT16P08779 473 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 TMIGD3P0DMS9 266 aaPredicted RBP13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 TBXA2RP21731 343 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 UQCRC1P31930 480 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 PRIM2P49643 509 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 DGKQP52824 942 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 DLX5P56178 289 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 FGFBP1Q14512 234 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 DAZAP2Q15038 168 aaPredicted RBP13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 C6orf136Q5SQH8 315 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 DCST1Q5T197 706 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 CPTPQ5TA50 214 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 OR5M10Q6IEU7 315 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 BHLHB9Q6PI77 547 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 LRRC34Q8IZ02 419 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 MEIOBQ8N635 442 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 OR2M3Q8NG83 312 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 PSMA8Q8TAA3 256 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 PPP1R14CQ8TAE6 165 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 MOAP1Q96BY2 351 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 COQ8BQ96D53 544 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 STACQ99469 402 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 TUBA1CQ9BQE3 449 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 MECRQ9BV79 373 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 TMUB1Q9BVT8 246 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 HOXD1Q9GZZ0 328 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 DSN1Q9H410 356 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 UBQLN4Q9NRR5 601 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 DUSP22Q9NRW4 184 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms