RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 SOX11P35716 441 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 GZMMP51124 257 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 CDK6Q00534 326 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 ADRM1Q16186 407 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 VMACQ2NL98 169 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 GPAT3Q53EU6 434 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 COLEC12Q5KU26 742 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 INTS11Q5TA45 600 aaKnown RBP15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 PRAMEF8Q5VWM4 474 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 PRAMEF7Q5VXH5 474 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 FCRLBQ6BAA4 426 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 REEP3Q6NUK4 255 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 GPALPP1Q8IXQ4 340 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 C10orf111Q8N326 155 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 BCORP1Q8N888 145 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 OR4N2Q8NGD1 307 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 FAM110BQ8TC76 370 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 SLC38A5Q8WUX1 472 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 ASB15Q8WXK1 588 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 PMM1Q92871 262 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 TMBIM1Q969X1 311 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 OMA1Q96E52 524 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 SDF2Q99470 211 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 THTPAQ9BU02 230 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 ANGPT4Q9Y264 503 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 KCNE3Q9Y6H6 103 aa15.21■□□□□ 0.03
TSPAN4-208ENST00000409531 ELOVL7A1L3X0 281 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 HS6ST1O60243 411 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 PPM1BO75688 479 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 NADKO95544 446 aaPredicted RBP15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 IL33O95760 270 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 NUDT7P0C024 238 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 TFPTP0C1Z6 253 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 FBXO45P0C2W1 286 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 GSK3BP49841 420 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 PNLIPRP2P54317 469 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 TLE1Q04724 770 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 SCARB2Q14108 478 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 EFR3AQ14156 821 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 SYPL1Q16563 259 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 B3GNTL1Q67FW5 361 aaPredicted RBP15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 FIGNL1Q6PIW4 674 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 C16orf47Q6ZP98 133 aaPredicted RBP15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 LRRC74BQ6ZQY2 392 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 PTOV1Q86YD1 416 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 ZZZ3Q8IYH5 903 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 MICU2Q8IYU8 434 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 HIPK4Q8NE63 616 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 DIO2Q92813 273 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 MAL2Q969L2 176 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 PNPLA2Q96AD5 504 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 MFRPQ9BY79 579 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 PIF1Q9H611 641 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 CD300AQ9UGN4 299 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 WDR45Q9Y484 360 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 NAV2Q8IVL1 2488 aa15.2■□□□□ 0.02
TSPAN4-208ENST00000409531 A0A0G2JPF8 293 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 PRORSD1PA6NEY8 169 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 OR6C70A6NIJ9 312 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 HNRNPCL2B2RXH8 293 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 HNRNPCL3B7ZW38 293 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 PYCARD-AS1I3L0S3 204 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 GSTA4O15217 222 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 GSC2O15499 205 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 GMNNO75496 209 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 H6PDO95479 791 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 HNRNPCL4P0DMR1 293 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 HTR1EP28566 365 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 PCGF2P35227 344 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 PGM1P36871 562 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 RFX3P48380 749 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 RPP38P78345 283 aaKnown RBP15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 FUT5Q11128 374 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 BNIP2Q12982 314 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 MFAP5Q13361 173 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 VEZF1Q14119 521 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 PLEKHN1Q494U1 663 aaPredicted RBP15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 AP1ARQ63HQ0 302 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 SLC6A19Q695T7 634 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 ASRGL1Q7L266 308 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 PRR22Q8IZ63 422 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 ANKFN1Q8N957 763 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 NFKBIDQ8NI38 313 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 BBS10Q8TAM1 723 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 SPACA9Q96E40 222 aaPredicted RBP15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 TMEM19Q96HH6 336 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 COL21A1Q96P44 957 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 ZNF350Q9GZX5 532 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 HOXD1Q9GZZ0 328 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 CACYBPQ9HB71 228 aaKnown RBP15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 HPF1Q9NWY4 346 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 B3GNT3Q9Y2A9 372 aa15.19■□□□□ 0.02
TSPAN4-208ENST00000409531 TTLL8A6PVC2 850 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 TP53I11O14683 189 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 TSPAN2O60636 221 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 PDE9AO76083 593 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 ME2P23368 584 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 SOX3P41225 446 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 CD97P48960 835 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms