RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 EVA1AQ9H8M9 152 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 UCK1Q9HA47 277 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 SLC6A20Q9NP91 592 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 FKBP14Q9NWM8 211 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 PAK1IP1Q9NWT1 392 aaPredicted RBP12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 KLHL28Q9NXS3 571 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 USP9YO00507 2555 aaPredicted RBP12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 TEP1Q99973 2627 aaKnown RBP12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 IGKV1-8A0A0C4DH67 115 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 OR2A25A4D2G3 310 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 ZAR1LA6NP61 321 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 PCDH17O14917 1159 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 ERAL1O75616 437 aaKnown RBP12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 FADS2O95864 444 aaKnown RBP12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 OR12D1P0DN82 309 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 PIPP12273 146 aaPredicted RBP12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 PPM1FP49593 454 aaPredicted RBP12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 CLK1P49759 484 aaKnown RBP12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 ENTPD1P49961 510 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 MAPK10P53779 464 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 CASP9P55211 416 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 SNRPGP62308 76 aaKnown RBP12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 NR1D2Q14995 579 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 DUSP7Q16829 419 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 CASP12Q6UXS9 341 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 CD300LDQ6UXZ3 194 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 PTCHD4Q6ZW05 846 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 ZNF367Q7RTV3 350 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 SZRD1Q7Z422 152 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 PAQR7Q86WK9 346 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 TOR1AIP2Q8NFQ8 470 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 FNDC8Q8TC99 324 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 JPH3Q8WXH2 748 aaPredicted RBP12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 SIGLEC11Q96RL6 698 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 SERINC2Q96SA4 455 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 STRADBQ9C0K7 418 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 ANKRD19PQ9H560 264 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 NMNAT1Q9HAN9 279 aaPredicted RBP12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 SLAMF7Q9NQ25 335 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 TEX10Q9NXF1 929 aaPredicted RBP12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 ACAD8Q9UKU7 415 aa12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 UTP20O75691 2785 aaKnown RBP12.05□□□□□ -0.48
SMARCB1-203ENST00000407082 CCDC88CQ9P219 2028 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 A0A1W2PRQ8 180 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 LILRA5A6NI73 299 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 CLDN25C9JDP6 229 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 PROM1O43490 865 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 OR10H3O60404 316 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 PFDN1O60925 122 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 UBXN7O94888 489 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 IFI6P09912 130 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 NR2F6P10588 404 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 LIPCP11150 499 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 CD36P16671 472 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 STT3AP46977 705 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 EPHA4P54764 986 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 EMP3P54852 163 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 CCL7P80098 99 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 GPLD1P80108 840 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 PIGFQ07326 219 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 DGCR6Q14129 220 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 PTGES3Q15185 160 aaKnown RBP12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 CEBPEQ15744 281 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 CTF1Q16619 201 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 AMZ1Q400G9 498 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 NKAIN2Q5VXU1 208 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 SLC16A12Q6ZSM3 486 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 ABHD13Q7L211 337 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 MMP21Q8N119 569 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 FAM26EQ8N5C1 309 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 MINDY2Q8NBR6 621 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 KBTBD8Q8NFY9 601 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 OR4E2Q8NGC2 313 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 OR8K5Q8NH50 307 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 OR10G6Q8NH81 332 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 APOBEC4Q8WW27 367 aaKnown RBP12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 APH1BQ8WW43 257 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 GGHQ92820 318 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 PMM1Q92871 262 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 OTUB1Q96FW1 271 aaPredicted RBP12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 LIN37Q96GY3 246 aaPredicted RBP12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 AHCYL2Q96HN2 611 aaKnown RBP12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 TRNT1Q96Q11 434 aaKnown RBP12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 GFM1Q96RP9 751 aaKnown RBP12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 NIPSNAP1Q9BPW8 284 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 TREX2Q9BQ50 279 aaPredicted RBP12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 ACTRT3Q9BYD9 372 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 POLR2J3Q9H1A7 115 aaKnown RBP12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 KRCC1Q9NPI7 259 aaPredicted RBP12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 FBXW2Q9UKT8 454 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 ZNF232Q9UNY5 417 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 IFT52Q9Y366 437 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 RPL36Q9Y3U8 105 aaKnown RBP12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 A3GALT2U3KPV4 340 aa12.04□□□□□ -0.48
SMARCB1-203ENST00000407082 IGHV1OR21-1A0A087WYE8 117 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 A0A1W2PR48 441 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 ANKRD33BA6NCL7 494 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 J3KTA2 159 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 ZSCAN9O15535 394 aaPredicted RBP12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 B3GALT2O43825 422 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms