RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 HPCAP84074 193 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 PSG6Q00889 435 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 GAB1Q13480 694 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 GNA13Q14344 377 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 NTRK2Q16620 822 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 DUSP5Q16690 384 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 TRMT5Q32P41 509 aaKnown RBP9.7□□□□□ -0.86
RPAIN-204ENST00000405578 PAGE3Q5JUK9 113 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 LRIF1Q5T3J3 769 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 NUP54Q7Z3B4 507 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 C16orf62Q7Z3J2 963 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 DHDDSQ86SQ9 333 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 RNF130Q86XS8 419 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 CLEC4FQ8N1N0 589 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 GOLM1Q8NBJ4 401 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 FAM98AQ8NCA5 519 aaKnown RBP9.7□□□□□ -0.86
RPAIN-204ENST00000405578 SLC16A11Q8NCK7 471 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 FBXO30Q8TB52 745 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 MIPOL1Q8TD10 442 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 TMBIM1Q969X1 311 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 OMA1Q96E52 524 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 GIMAP5Q96F15 307 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 RMND5BQ96G75 393 aaPredicted RBP9.7□□□□□ -0.86
RPAIN-204ENST00000405578 COL21A1Q96P44 957 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 SECISBP2Q96T21 854 aaKnown RBP9.7□□□□□ -0.86
RPAIN-204ENST00000405578 CCDC106Q9BWC9 280 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 BTBD2Q9BX70 525 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 TRIM8Q9BZR9 551 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 PAIP1Q9H074 479 aaKnown RBP9.7□□□□□ -0.86
RPAIN-204ENST00000405578 MYLK2Q9H1R3 596 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 EFCAB1Q9HAE3 211 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 ZBTB20Q9HC78 741 aaPredicted RBP9.7□□□□□ -0.86
RPAIN-204ENST00000405578 SLC52A3Q9NQ40 469 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 CNIH4Q9P003 139 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 PCDHB14Q9Y5E9 798 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 KLF2Q9Y5W3 355 aaPredicted RBP9.7□□□□□ -0.86
RPAIN-204ENST00000405578 ASPDHA6ND91 283 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 NME6O75414 186 aaPredicted RBP9.69□□□□□ -0.86
RPAIN-204ENST00000405578 NADKO95544 446 aaPredicted RBP9.69□□□□□ -0.86
RPAIN-204ENST00000405578 EDN3P14138 238 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 HPGDP15428 266 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 HOXB4P17483 251 aaPredicted RBP9.69□□□□□ -0.86
RPAIN-204ENST00000405578 LCN1P31025 176 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 PNLIPRP2P54317 469 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 RPS26P62854 115 aaKnown RBP9.69□□□□□ -0.86
RPAIN-204ENST00000405578 FADDQ13158 208 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 ZNF169Q14929 603 aaPredicted RBP9.69□□□□□ -0.86
RPAIN-204ENST00000405578 ZNF791Q3KP31 576 aaPredicted RBP9.69□□□□□ -0.86
RPAIN-204ENST00000405578 ZNF766Q5HY98 468 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 TBCELQ5QJ74 424 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 SLC22A10Q63ZE4 541 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 REP15Q6BDI9 236 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 SPINK14Q6IE38 97 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 SLC25A25Q6KCM7 469 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 TNFAIP8L2Q6P589 184 aaPredicted RBP9.69□□□□□ -0.86
RPAIN-204ENST00000405578 NPSR1Q6W5P4 371 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 Q6ZS92 163 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 WDR53Q7Z5U6 358 aaPredicted RBP9.69□□□□□ -0.86
RPAIN-204ENST00000405578 CDH24Q86UP0 819 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 PRR22Q8IZ63 422 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 OR52N2Q8NGI0 321 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 OR5M3Q8NGP4 307 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 PNPT1Q8TCS8 783 aaKnown RBP9.69□□□□□ -0.86
RPAIN-204ENST00000405578 GRHL3Q8TE85 626 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 ZFP90Q8TF47 636 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 XAGE5Q8WWM1 108 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 ITLN2Q8WWU7 325 aaPredicted RBP9.69□□□□□ -0.86
RPAIN-204ENST00000405578 PIK3R3Q92569 461 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 DIO2Q92813 273 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 HOXB13Q92826 284 aaPredicted RBP9.69□□□□□ -0.86
RPAIN-204ENST00000405578 OR7D2Q96RA2 312 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 ADOQ96SZ5 270 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 CGREF1Q99674 301 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 THUMPD3Q9BV44 507 aaKnown RBP9.69□□□□□ -0.86
RPAIN-204ENST00000405578 OR51I1Q9H343 314 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 IL1RL2Q9HB29 575 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 CACYBPQ9HB71 228 aaKnown RBP9.69□□□□□ -0.86
RPAIN-204ENST00000405578 HHATLQ9HCP6 504 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 SACM1LQ9NTJ5 587 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 LIPT1Q9Y234 373 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 KLF13Q9Y2Y9 288 aaPredicted RBP9.69□□□□□ -0.86
RPAIN-204ENST00000405578 PCDHGB6Q9Y5F9 930 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 CSAG2Q9Y5P2 127 aa9.69□□□□□ -0.86
RPAIN-204ENST00000405578 C15orf38-AP3S2A0A0A6YYH1 394 aa9.68□□□□□ -0.86
RPAIN-204ENST00000405578 KLRC4-KLRK1H3BQV0 150 aa9.68□□□□□ -0.86
RPAIN-204ENST00000405578 AIM2O14862 343 aa9.68□□□□□ -0.86
RPAIN-204ENST00000405578 NEURL1O76050 574 aa9.68□□□□□ -0.86
RPAIN-204ENST00000405578 KCNK2O95069 426 aa9.68□□□□□ -0.86
RPAIN-204ENST00000405578 IL33O95760 270 aa9.68□□□□□ -0.86
RPAIN-204ENST00000405578 SP1P08047 785 aa9.68□□□□□ -0.86
RPAIN-204ENST00000405578 STSP08842 583 aa9.68□□□□□ -0.86
RPAIN-204ENST00000405578 OR12D1P0DN82 309 aa9.68□□□□□ -0.86
RPAIN-204ENST00000405578 ACP2P11117 423 aa9.68□□□□□ -0.86
RPAIN-204ENST00000405578 HTR1EP28566 365 aa9.68□□□□□ -0.86
RPAIN-204ENST00000405578 MAP3K8P41279 467 aa9.68□□□□□ -0.86
RPAIN-204ENST00000405578 FBXW4P57775 412 aa9.68□□□□□ -0.86
RPAIN-204ENST00000405578 KRTAP10-9P60411 292 aa9.68□□□□□ -0.86
RPAIN-204ENST00000405578 INAQ16352 499 aa9.68□□□□□ -0.86
RPAIN-204ENST00000405578 DCST2Q5T1A1 773 aa9.68□□□□□ -0.86
RPAIN-204ENST00000405578 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms