RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 SCARB2Q14108 478 aa30.59■■■□□ 2.49
CSNK1E-204ENST00000403904 GPR68Q15743 365 aa30.59■■■□□ 2.49
CSNK1E-204ENST00000403904 ZNF630Q2M218 657 aaPredicted RBP30.59■■■□□ 2.49
CSNK1E-204ENST00000403904 RPS26P11Q5JNZ5 115 aaPredicted RBP30.59■■■□□ 2.49
CSNK1E-204ENST00000403904 SPINK14Q6IE38 97 aa30.59■■■□□ 2.49
CSNK1E-204ENST00000403904 NUP54Q7Z3B4 507 aa30.59■■■□□ 2.49
CSNK1E-204ENST00000403904 DND1Q8IYX4 353 aaKnown RBP30.59■■■□□ 2.49
CSNK1E-204ENST00000403904 TTC9Q92623 222 aa30.59■■■□□ 2.49
CSNK1E-204ENST00000403904 HGDQ93099 445 aa30.59■■■□□ 2.49
CSNK1E-204ENST00000403904 SLC38A1Q9H2H9 487 aa30.59■■■□□ 2.49
CSNK1E-204ENST00000403904 TRIM45Q9H8W5 580 aaPredicted RBP30.59■■■□□ 2.49
CSNK1E-204ENST00000403904 NPIPA5A0A0B4J1W7 369 aa30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 FAM220BPB1ANY3 271 aa30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 C5orf58C9J3I9 102 aa30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 NPIPA7E9PJI5 369 aa30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 NPIPA8P0DM63 369 aa30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 CRISP3P54108 245 aa30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 RBBP4Q09028 425 aa30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 KCNAB2Q13303 367 aa30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 VMACQ2NL98 169 aa30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 FLYWCH1Q4VC44 716 aa30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 TYW3Q6IPR3 259 aaKnown RBP30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 FRRS1Q6ZNA5 592 aa30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 LRRC74BQ6ZQY2 392 aa30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 MDGA2Q7Z553 956 aa30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 GPALPP1Q8IXQ4 340 aa30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 TREX2Q9BQ50 279 aaPredicted RBP30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 CSAG2Q9Y5P2 127 aa30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 SEC23IPQ9Y6Y8 1000 aaKnown RBP30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 ICOSLGO75144 302 aa30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 NEURL1O76050 574 aa30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 NCALDP61601 193 aa30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 EFR3AQ14156 821 aa30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 GNA13Q14344 377 aa30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 OR1C1Q15619 314 aa30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 DNAL1Q4LDG9 190 aa30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 SAMD4BQ5PRF9 694 aaKnown RBP30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 KCTD14Q9BQ13 255 aaPredicted RBP30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 ZNF451Q9Y4E5 1061 aa30.58■■■□□ 2.49
CSNK1E-204ENST00000403904 CDK2AP1O14519 115 aa30.57■■■□□ 2.48
CSNK1E-204ENST00000403904 HS6ST1O60243 411 aa30.57■■■□□ 2.48
CSNK1E-204ENST00000403904 UTS2O95399 124 aa30.57■■■□□ 2.48
CSNK1E-204ENST00000403904 CD97P48960 835 aa30.57■■■□□ 2.48
CSNK1E-204ENST00000403904 REEP3Q6NUK4 255 aa30.57■■■□□ 2.48
CSNK1E-204ENST00000403904 RTL4Q6ZR62 310 aa30.57■■■□□ 2.48
CSNK1E-204ENST00000403904 FAM156AQ8NDB6 213 aa30.57■■■□□ 2.48
CSNK1E-204ENST00000403904 CATSPER1Q8NEC5 780 aa30.57■■■□□ 2.48
CSNK1E-204ENST00000403904 OR4C3Q8NH37 302 aa30.57■■■□□ 2.48
CSNK1E-204ENST00000403904 SGCZQ96LD1 299 aa30.57■■■□□ 2.48
CSNK1E-204ENST00000403904 NODALQ96S42 347 aa30.57■■■□□ 2.48
CSNK1E-204ENST00000403904 THTPAQ9BU02 230 aa30.57■■■□□ 2.48
CSNK1E-204ENST00000403904 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP30.57■■■□□ 2.486e-7■■■■■ 27.1
CSNK1E-204ENST00000403904 CALML5Q9NZT1 146 aa30.57■■■□□ 2.48
CSNK1E-204ENST00000403904 CD300AQ9UGN4 299 aa30.57■■■□□ 2.48
CSNK1E-204ENST00000403904 TP53TG5Q9Y2B4 290 aa30.57■■■□□ 2.48
CSNK1E-204ENST00000403904 CHCHD2Q9Y6H1 151 aaPredicted RBP30.57■■■□□ 2.48
CSNK1E-204ENST00000403904 TP53I11O14683 189 aa30.56■■■□□ 2.48
CSNK1E-204ENST00000403904 TCN1P20061 433 aaPredicted RBP30.56■■■□□ 2.48
CSNK1E-204ENST00000403904 RHDQ02161 417 aa30.56■■■□□ 2.48
CSNK1E-204ENST00000403904 CEACAM7Q14002 265 aa30.56■■■□□ 2.48
CSNK1E-204ENST00000403904 GRAMD1BQ3KR37 738 aa30.56■■■□□ 2.48
CSNK1E-204ENST00000403904 HMGN2P46Q86SG4 172 aa30.56■■■□□ 2.48
CSNK1E-204ENST00000403904 METTL25Q8N6Q8 603 aa30.56■■■□□ 2.48
CSNK1E-204ENST00000403904 TM9SF4Q92544 642 aa30.56■■■□□ 2.48
CSNK1E-204ENST00000403904 ZG16BQ96DA0 208 aa30.56■■■□□ 2.48
CSNK1E-204ENST00000403904 TMCO6Q96DC7 493 aa30.56■■■□□ 2.48
CSNK1E-204ENST00000403904 SAP130Q9H0E3 1048 aa30.56■■■□□ 2.48
CSNK1E-204ENST00000403904 QRSL1Q9H0R6 528 aaKnown RBP30.56■■■□□ 2.48
CSNK1E-204ENST00000403904 POLE3Q9NRF9 147 aa30.56■■■□□ 2.48
CSNK1E-204ENST00000403904 ELOVL7A1L3X0 281 aa30.55■■■□□ 2.48
CSNK1E-204ENST00000403904 PGM3O95394 542 aa30.55■■■□□ 2.48
CSNK1E-204ENST00000403904 AQP1P29972 269 aa30.55■■■□□ 2.48
CSNK1E-204ENST00000403904 ERICH5Q6P6B1 374 aa30.55■■■□□ 2.48
CSNK1E-204ENST00000403904 IGFL3Q6UXB1 125 aa30.55■■■□□ 2.48
CSNK1E-204ENST00000403904 MICU2Q8IYU8 434 aa30.55■■■□□ 2.48
CSNK1E-204ENST00000403904 ZNF619Q8N2I2 560 aa30.55■■■□□ 2.48
CSNK1E-204ENST00000403904 HIPK4Q8NE63 616 aa30.55■■■□□ 2.48
CSNK1E-204ENST00000403904 CLPTM1LQ96KA5 538 aa30.55■■■□□ 2.48
CSNK1E-204ENST00000403904 SH2D2AQ9NP31 389 aa30.55■■■□□ 2.48
CSNK1E-204ENST00000403904 PRPF19Q9UMS4 504 aaKnown RBP30.55■■■□□ 2.48
CSNK1E-204ENST00000403904 PCDHGB7Q9Y5F8 929 aa30.55■■■□□ 2.48
CSNK1E-204ENST00000403904 KIAA0513O60268 411 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 DNAJA2O60884 412 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 CCL3P10147 92 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 PCGF2P35227 344 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 MSX2P35548 267 aaPredicted RBP30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 DCTP40126 519 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 LACTB2Q53H82 288 aaPredicted RBP30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 BICRALQ6AI39 1079 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 ZADH2Q8N4Q0 377 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 GOLM1Q8NBJ4 401 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 MDS2Q8NDY4 140 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 SPPL2AQ8TCT8 520 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 PAQR8Q8TEZ7 354 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 BCL2L10Q9HD36 194 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 KCNE5Q9UJ90 142 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 ANGPT4Q9Y264 503 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 A0A0G2JPF8 293 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 HNRNPCL2B2RXH8 293 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 HNRNPCL3B7ZW38 293 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms