RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 IL2RAP01589 272 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 PRPS1L1P21108 318 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 DPP4P27487 766 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 GABRA3P34903 492 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 CLK3P49761 638 aaKnown RBP13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 PRR5P85299 388 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 GANABQ14697 944 aaKnown RBP13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 PTGR1Q14914 329 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 CHI3L2Q15782 390 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 EXOSC6Q5RKV6 272 aaKnown RBP13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 CES4AQ5XG92 561 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 OR5M10Q6IEU7 315 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 ADGRE4PQ86SQ3 457 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 TRIM42Q8IWZ5 723 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 NAXEQ8NCW5 288 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 TNIP2Q8NFZ5 429 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 PSMA8Q8TAA3 256 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 TUBGCP3Q96CW5 907 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 UCN2Q96RP3 112 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 C1orf50Q9BV19 199 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 MCCC2Q9HCC0 563 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 HHATLQ9HCP6 504 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 SIRT3Q9NTG7 399 aaPredicted RBP13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 ATAD3AQ9NVI7 634 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 ASIC5Q9NY37 505 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 KCNN3Q9UGI6 736 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 CCDC168Q8NDH2 2452 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 IGLV3-32A0A0A0MS00 114 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 GXYLT2A0PJZ3 443 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 ENO4A6NNW6 628 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 ITM2AO43736 263 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 ZIC3O60481 467 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 NGFRP08138 427 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 MYZAPP0CAP1 466 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 LHX2P50458 406 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 ASCL1P50553 236 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 C21orf58P58505 322 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 ABCE1P61221 599 aaKnown RBP13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 BCL2A1Q16548 175 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 FBXL19-AS1Q494R0 122 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 IL23RQ5VWK5 629 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 MFSD12Q6NUT3 480 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 POMZP3Q6PJE2 187 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 SZRD1Q7Z422 152 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 LURAP1LQ8IV03 231 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 RIMKLAQ8IXN7 391 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 ZNF781Q8N8C0 355 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 RELL2Q8NC24 303 aaPredicted RBP13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 OR2M3Q8NG83 312 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 OR7A2PQ8NGA2 310 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 GPR151Q8TDV0 419 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 PIK3R3Q92569 461 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 COQ8BQ96D53 544 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 FAM120BQ96EK7 910 aaKnown RBP13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 RMND5BQ96G75 393 aaPredicted RBP13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 SFXN2Q96NB2 322 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 ZFP3Q96NJ6 502 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 TRIB1Q96RU8 372 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 CENPHQ9H3R5 247 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 FLRT3Q9NZU0 649 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 HAO1Q9UJM8 370 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 EIF3LQ9Y262 564 aaKnown RBP13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 RAP2CQ9Y3L5 183 aa13.49□□□□□ -0.25
SMIM11A-203ENST00000399299 A0A1W2PRB8 838 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 WDR91A4D1P6 747 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 H0Y3Z8 333 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 UTS2O95399 124 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 IL18BPO95998 194 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 IGKV1D-16P01601 117 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 ACP2P11117 423 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 LAMP1P11279 417 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 ZNF708P17019 499 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 CAPN3P20807 821 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 LCN1P31025 176 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 PEX19P40855 299 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 RFX3P48380 749 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 PRIM2P49643 509 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 ZNF136P52737 540 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 PRKAG1P54619 331 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 DIO3P55073 304 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 WNT3P56703 355 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 CLDN18P56856 261 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 B3GALT5-AS1P59052 145 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 TLE4Q04727 773 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 EMX2Q04743 252 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 C17orf67Q0P5P2 114 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 MPP2Q14168 576 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 GRAMD1BQ3KR37 738 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 CPTPQ5TA50 214 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 CAMKMTQ7Z624 323 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 SLC16A11Q8NCK7 471 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 FAM110BQ8TC76 370 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 OR5P2Q8WZ92 322 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 SLC9A6Q92581 669 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 LRRC46Q96FV0 321 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 PRPF18Q99633 342 aaKnown RBP13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 TUBA1CQ9BQE3 449 aa13.48□□□□□ -0.25
SMIM11A-203ENST00000399299 TBL1XR1Q9BZK7 514 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms