RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 ETFAP13804 333 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 EVI2BP34910 448 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 CRATP43155 626 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 GRAMD1BQ3KR37 738 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 ZNF324BQ6AW86 544 aaPredicted RBP23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 DLEU7Q6UYE1 221 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 C16orf62Q7Z3J2 963 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 DHDDSQ86SQ9 333 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 POU5F2Q8N7G0 328 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 OR4C3Q8NH37 302 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 DNAJB8Q8NHS0 232 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 NR4A3Q92570 626 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 BARD1Q99728 777 aaKnown RBP23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 CCDC106Q9BWC9 280 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 EXD2Q9NVH0 621 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 SVILO95425 2214 aa23.21■■□□□ 1.31
TMEM55B-202ENST00000398020 NPIPA5A0A0B4J1W7 369 aa23.21■■□□□ 1.31
TMEM55B-202ENST00000398020 LRRC3CA6NJW4 275 aa23.21■■□□□ 1.31
TMEM55B-202ENST00000398020 NPIPA7E9PJI5 369 aa23.21■■□□□ 1.31
TMEM55B-202ENST00000398020 ASNA1O43681 348 aa23.21■■□□□ 1.31
TMEM55B-202ENST00000398020 TRIM3O75382 744 aaPredicted RBP23.21■■□□□ 1.31
TMEM55B-202ENST00000398020 NPIPA8P0DM63 369 aa23.21■■□□□ 1.31
TMEM55B-202ENST00000398020 ADSLP30566 484 aaPredicted RBP23.21■■□□□ 1.31
TMEM55B-202ENST00000398020 MASP1P48740 699 aa23.21■■□□□ 1.31
TMEM55B-202ENST00000398020 PACS2Q86VP3 889 aa23.21■■□□□ 1.31
TMEM55B-202ENST00000398020 POGLUT1Q8NBL1 392 aa23.21■■□□□ 1.31
TMEM55B-202ENST00000398020 SDF2Q99470 211 aa23.21■■□□□ 1.31
TMEM55B-202ENST00000398020 RTN4RQ9BZR6 473 aa23.21■■□□□ 1.31
TMEM55B-202ENST00000398020 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.21■■□□□ 1.31
TMEM55B-202ENST00000398020 ARL2BPQ9Y2Y0 163 aa23.21■■□□□ 1.31
TMEM55B-202ENST00000398020 HRH3Q9Y5N1 445 aa23.21■■□□□ 1.31
TMEM55B-202ENST00000398020 TRBV5-3A0A0A0MS03 114 aa23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 NPIPA5E9PKD4 350 aa23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 GNB5O14775 395 aa23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 TFECO14948 347 aaPredicted RBP23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 FADS1O60427 444 aa23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 SOX30O94993 753 aa23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 SNX4O95219 450 aa23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 RFPL3SP0C7P2 107 aa23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 ATP6V1C1P21283 382 aa23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 PPIAP62937 165 aaKnown RBP23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 FUT5Q11128 374 aa23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 SNTA1Q13424 505 aa23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 NFYCQ13952 458 aa23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 MAPRE2Q15555 327 aa23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 ATAD3BQ5T9A4 648 aa23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 FNDC7Q5VTL7 733 aa23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 OR5M10Q6IEU7 315 aa23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 SLC30A6Q6NXT4 461 aa23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 TMEM81Q6P7N7 255 aa23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 DPP10Q8N608 796 aa23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 ZNF597Q96LX8 424 aa23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 TRIM8Q9BZR9 551 aa23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 ZFP64Q9NPA5 681 aa23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 BOKQ9UMX3 212 aaPredicted RBP23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 NPIPA1Q9UND3 350 aa23.2■■□□□ 1.3
TMEM55B-202ENST00000398020 PRAMEF27A3QJZ7 478 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 SLC22A2O15244 555 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 FCMRO60667 390 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 FAM107AO95990 144 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 AGR2O95994 175 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 RNF144AP50876 292 aaPredicted RBP23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 STX5Q13190 355 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 CYLC2Q14093 348 aaPredicted RBP23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 ARHGAP11BQ3KRB8 267 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 MMEL1Q495T6 779 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 HEPHL1Q6MZM0 1159 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 APOOLQ6UXV4 268 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 MARCH3Q86UD3 253 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 TREML1Q86YW5 311 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 CHDHQ8NE62 594 aaPredicted RBP23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 OR52N2Q8NGI0 321 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 RNF138Q8WVD3 245 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 MIB2Q96AX9 1013 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 GNRHR2Q96P88 292 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 SLX1AQ9BQ83 275 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 MYLK2Q9H1R3 596 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 IKZF5Q9H5V7 419 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 RP1L1Q8IWN7 2480 aaPredicted RBP23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 GLSO94925 669 aaPredicted RBP23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 OXSR1O95747 527 aaPredicted RBP23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 MAGEA5P43359 124 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 FLYWCH1Q4VC44 716 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 REP15Q6BDI9 236 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 SIAH3Q8IW03 269 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 TMEM251Q8N6I4 163 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 ROPN1LQ96C74 230 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 NTNG2Q96CW9 530 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 TBL1XR1Q9BZK7 514 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 MKLN1Q9UL63 735 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 WIF1Q9Y5W5 379 aa23.19■■□□□ 1.3
TMEM55B-202ENST00000398020 RELNP78509 3460 aa23.18■■□□□ 1.3
TMEM55B-202ENST00000398020 NCKAP5O14513 1909 aa23.18■■□□□ 1.3
TMEM55B-202ENST00000398020 ZIC2O95409 532 aaPredicted RBP23.18■■□□□ 1.3
TMEM55B-202ENST00000398020 ANXA11P50995 505 aaKnown RBP23.18■■□□□ 1.3
TMEM55B-202ENST00000398020 GAS1P54826 345 aa23.18■■□□□ 1.3
TMEM55B-202ENST00000398020 CAPRIN1Q14444 709 aaKnown RBP23.18■■□□□ 1.3
TMEM55B-202ENST00000398020 RGNQ15493 299 aa23.18■■□□□ 1.3
TMEM55B-202ENST00000398020 SYPL1Q16563 259 aa23.18■■□□□ 1.3
TMEM55B-202ENST00000398020 GPAT3Q53EU6 434 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms