RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 PPP2CBP62714 309 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 PPP2CAP67775 309 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 HTRA3P83110 453 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 IL11RAQ14626 422 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF544Q6NX49 715 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 NUP43Q8NFH3 380 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 OR5L2Q8NGL0 311 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 CHPT1Q8WUD6 406 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 NXF2Q9GZY0 626 aaKnown RBP5.48□□□□□ -1.53
PTPRD-206ENST00000397617 MAT2BQ9NZL9 334 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 GSTK1Q9Y2Q3 226 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 TLR4O00206 839 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 BTN3A3O00478 584 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 CYP7B1O75881 506 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 KLHL18O94889 574 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 IGHA1P01876 353 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 PCMT1P22061 227 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 PAICSP22234 425 aaKnown RBP5.48□□□□□ -1.53
PTPRD-206ENST00000397617 PLA2G16P53816 162 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 PRKCDQ05655 676 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 RUNX1T1Q06455 604 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF239Q16600 458 aaKnown RBP5.48□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF385BQ569K4 471 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 RHBDD2Q6NTF9 364 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF620Q6ZNG0 422 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 RBM44Q6ZP01 1051 aaKnown RBP5.48□□□□□ -1.53
PTPRD-206ENST00000397617 MORN4Q8NDC4 146 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 CLHC1Q8NHS4 586 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 ST8SIA1Q92185 356 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 CNBD2Q96M20 576 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 REV1Q9UBZ9 1251 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 KCNG2Q9UJ96 466 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 STK25O00506 426 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 CPSF4O95639 269 aaKnown RBP5.47□□□□□ -1.53
PTPRD-206ENST00000397617 NUDT14O95848 222 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 DEFA1P59665 94 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 DEFA3P59666 94 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 LASP1Q14847 261 aaKnown RBP5.47□□□□□ -1.53
PTPRD-206ENST00000397617 ZER1Q7Z7L7 766 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 ARL14Q8N4G2 192 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 SLC25A43Q8WUT9 341 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-206ENST00000397617 CCDC32Q9BV29 185 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 SCHIP1Q9P0W5 487 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-206ENST00000397617 C19orf25Q9UFG5 118 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-206ENST00000397617 ICAM5Q9UMF0 924 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 TXNDC12O95881 172 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 IGHEP01854 428 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 GSNP06396 782 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 MYL12AP19105 171 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 RAPSNQ13702 412 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 TOE1Q96GM8 510 aaKnown RBP5.47□□□□□ -1.53
PTPRD-206ENST00000397617 ZPBPQ9BS86 351 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 EMC3Q9P0I2 261 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 HIF3AQ9Y2N7 669 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 GPR55Q9Y2T6 319 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-206ENST00000397617 MED31Q9Y3C7 131 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF407Q9C0G0 2248 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 IGLV3-32A0A0A0MS00 114 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 BRINP1O60477 761 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 MSX2P35548 267 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-206ENST00000397617 RNF144AP50876 292 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-206ENST00000397617 POU6F2P78424 691 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-206ENST00000397617 PLCL1Q15111 1095 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 LCN1P1Q5VSP4 162 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 BAIAP2L2Q6UXY1 529 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 KCTD8Q6ZWB6 473 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 TEX47Q8TBZ9 253 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 XAGE5Q8WWM1 108 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 UBQLN4Q9NRR5 601 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 TEX10Q9NXF1 929 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-206ENST00000397617 PTTG3PQ9NZH4 202 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 PCDHGA6Q9Y5G7 932 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 HEMK1Q9Y5R4 338 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-206ENST00000397617 LINC01387J3KSC0 135 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 PHYHO14832 338 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 SCAMP1O15126 338 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 AQP9O43315 295 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 CDC40O60508 579 aaKnown RBP eCLIP5.47□□□□□ -1.53
PTPRD-206ENST00000397617 LRATO95237 230 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 PTTG1O95997 202 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 LIM2P55344 173 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 IL5RAQ01344 420 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 EFR3AQ14156 821 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 NDUFA5Q16718 116 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 TAF8Q7Z7C8 310 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 PLEKHA8Q96JA3 519 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 WACQ9BTA9 647 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 TAPBPLQ9BX59 468 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 EBPLQ9BY08 206 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 MOKQ9UQ07 419 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 USF3Q68DE3 2245 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 MYO18BQ8IUG5 2567 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 SHANK1Q9Y566 2161 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 B4E171 279 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 LRP3O75074 770 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 RPLP0P05388 317 aaKnown RBP5.47□□□□□ -1.53
PTPRD-206ENST00000397617 NCK1P16333 377 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 IL7RP16871 459 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 NELFEP18615 380 aaKnown RBP5.47□□□□□ -1.53
PTPRD-206ENST00000397617 CD72P21854 359 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms