RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 BCORP1Q8N888 145 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 OR10Q1Q8NGQ4 319 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 OR2T29Q8NH02 315 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 M1APQ8TC57 530 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 NR4A3Q92570 626 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 RMND5BQ96G75 393 aaPredicted RBP12.58□□□□□ -0.4
MCF2L-209ENST00000397036 ZNF300Q96RE9 604 aaPredicted RBP12.58□□□□□ -0.4
MCF2L-209ENST00000397036 OSBPL10Q9BXB5 764 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 KLHL4Q9C0H6 718 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 NRSN2Q9GZP1 204 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 NXF5Q9H1B4 397 aaKnown RBP12.58□□□□□ -0.4
MCF2L-209ENST00000397036 ARMC7Q9H6L4 198 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 SLC9A8Q9Y2E8 581 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 OR10H1Q9Y4A9 318 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 HS3ST3B1Q9Y662 390 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 ENPP4Q9Y6X5 453 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 IGHV1-45A0A0A0MS14 117 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 PRAMEF25A6NGN4 478 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 RAD1O60671 282 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 DNAJB5O75953 348 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 ZFAND5O76080 213 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 IFNW1P05000 195 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 NID1P14543 1247 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 NAGAP17050 411 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 RBMS1P29558 406 aaKnown RBP12.57□□□□□ -0.4
MCF2L-209ENST00000397036 ATP12AP54707 1039 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 DNASE1L3Q13609 305 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 LIN52Q52LA3 116 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 EIPR1Q53HC9 387 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 CCNJQ5T5M9 372 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 PLAG1Q6DJT9 500 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 PPP4R4Q6NUP7 873 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 DTX1Q86Y01 620 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 GRAMD2AQ8IUY3 354 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 CMIPQ8IY22 773 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 OR4N2Q8NGD1 307 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 ELP5Q8TE02 316 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 ARHGDIGQ99819 225 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 C9orf16Q9BUW7 83 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 KLHL28Q9NXS3 571 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 DLL3Q9NYJ7 618 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 ZNF223Q9UK11 482 aaPredicted RBP12.57□□□□□ -0.4
MCF2L-209ENST00000397036 KCND3Q9UK17 655 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 PRDM4Q9UKN5 801 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 ACAD8Q9UKU7 415 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 CDV3Q9UKY7 258 aaKnown RBP12.57□□□□□ -0.4
MCF2L-209ENST00000397036 SH3GLB1Q9Y371 365 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 IGHV3-20A0A0C4DH32 117 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 SOCS6O14544 535 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 ADAMDEC1O15204 470 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 GFRA3O60609 400 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 UGT2B17O75795 530 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 EPPINO95925 133 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 IGKV1D-16P01601 117 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 NGFRP08138 427 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 COX6A1P12074 109 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 ICAM2P13598 275 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 IL7RP16871 459 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 ZNF26P17031 533 aaPredicted RBP12.57□□□□□ -0.4
MCF2L-209ENST00000397036 PEX2P28328 305 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 ADH7P40394 386 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 PNLIPRP2P54317 469 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 EEF1A1P68104 462 aaKnown RBP12.57□□□□□ -0.4
MCF2L-209ENST00000397036 GABREP78334 506 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 GPR68Q15743 365 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 FLYWCH1Q4VC44 716 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 FIGNL1Q6PIW4 674 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 KIRREL2Q6UWL6 708 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 NDUFAF7Q7L592 441 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 CARM1Q86X55 608 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 SLC34A3Q8N130 599 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 OR11G2Q8NGC1 345 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 DIO2Q92813 273 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 EME1Q96AY2 570 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 AMBRA1Q9C0C7 1298 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 SEMA6AQ9H2E6 1030 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 MMP25Q9NPA2 562 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 FBXO34Q9NWN3 711 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 KCNE5Q9UJ90 142 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 ABCG2Q9UNQ0 655 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 ZNF443Q9Y2A4 671 aaPredicted RBP12.57□□□□□ -0.4
MCF2L-209ENST00000397036 FAM32AQ9Y421 112 aaKnown RBP12.57□□□□□ -0.4
MCF2L-209ENST00000397036 CHST2Q9Y4C5 530 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 LRRC42Q9Y546 428 aa12.57□□□□□ -0.4
MCF2L-209ENST00000397036 SPEGQ15772 3267 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 FAM149AA5PLN7 773 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 GNGT2O14610 69 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 TSPAN2O60636 221 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 MT-ND1P03886 318 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 DNAJA1P31689 397 aaKnown RBP12.56□□□□□ -0.4
MCF2L-209ENST00000397036 SMIM11AP58511 58 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 RTP5Q14D33 572 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 MAPK14Q16539 360 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 LPCAT4Q643R3 524 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 TCTN3Q6NUS6 607 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 ZBTB49Q6ZSB9 765 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 OLIG3Q7RTU3 272 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 ZNF605Q86T29 641 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 VRK2Q86Y07 508 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 HIPK1Q86Z02 1210 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms