RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 LINC00518Q8N0U6 118 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 ZNF366Q8N895 744 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 DUSP18Q8NEJ0 188 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 OR2T29Q8NH02 315 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 NETO1Q8TDF5 533 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 KLHL6Q8WZ60 621 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 CTHRC1Q96CG8 243 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 GIMAP5Q96F15 307 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 HYLS1Q96M11 299 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 KCNC2Q96PR1 638 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 CCNL2Q96S94 520 aaPredicted RBP5.03□□□□□ -1.6
VPS41-203ENST00000395969 WRAP53Q9BUR4 548 aaKnown RBP5.03□□□□□ -1.6
VPS41-203ENST00000395969 TSPAN10Q9H1Z9 355 aaPredicted RBP5.03□□□□□ -1.6
VPS41-203ENST00000395969 PPA2Q9H2U2 334 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 SCPEP1Q9HB40 452 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 POLMQ9NP87 494 aaPredicted RBP5.03□□□□□ -1.6
VPS41-203ENST00000395969 FZD3Q9NPG1 666 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 RASSF1Q9NS23 344 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 TAAR2Q9P1P5 351 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 DIMT1Q9UNQ2 313 aaKnown RBP5.03□□□□□ -1.6
VPS41-203ENST00000395969 HSPB11Q9Y547 144 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 SNX8Q9Y5X2 465 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 PIAS3Q9Y6X2 628 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 RPS10-NUDT3A0A1W2PQS6 291 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 PROM1O43490 865 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 FMO6PO60774 539 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 KLF8O95600 359 aaPredicted RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 SERPINA1P01009 418 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 C9P02748 559 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 CSF2P04141 144 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 CHRM5P08912 532 aaPredicted RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 NME1P15531 152 aaKnown RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 GABRB1P18505 474 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 PREPP48147 710 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 SELENOWP63302 87 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 EFNB1P98172 346 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 HOXC5Q00444 222 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 ACSM2AQ08AH3 577 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 PTGR1Q14914 329 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 ODF1Q14990 250 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 HEPACAMQ14CZ8 416 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 AANATQ16613 207 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 TIMM50Q3ZCQ8 353 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 TMEM201Q5SNT2 666 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 ACSM2BQ68CK6 577 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 OR4C11Q6IEV9 310 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 TMPRSS11AQ6ZMR5 421 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 USP53Q70EK8 1073 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 C16orf62Q7Z3J2 963 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 ADGRG3Q86Y34 549 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 LAX1Q8IWV1 398 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 CLDN22Q8N7P3 220 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 NINJ1Q92982 152 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 KIAA1143Q96AT1 154 aaPredicted RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 OR2A5Q96R48 311 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 DPYSL5Q9BPU6 564 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 RPP25Q9BUL9 199 aaKnown RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 C1QTNF6Q9BXI9 259 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 RACGAP1Q9H0H5 632 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 MTG2Q9H4K7 406 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 UBE2ZQ9H832 354 aaPredicted RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 HEXA-AS1Q9H8Q6 139 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 FANCFQ9NPI8 374 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 SLAMF7Q9NQ25 335 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 SLC6A13Q9NSD5 602 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 ING3Q9NXR8 418 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 MRPL39Q9NYK5 338 aaKnown RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 ZNF624Q9P2J8 865 aaPredicted RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 SPASTQ9UBP0 616 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 ENOPH1Q9UHY7 261 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 ABCG2Q9UNQ0 655 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 MRPS17Q9Y2R5 130 aaKnown RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 KLF2Q9Y5W3 355 aaPredicted RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 ALG5Q9Y673 324 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 OR2AG2A6NM03 316 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 METTL12A8MUP2 240 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 M0R3H8 397 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 CLIC1O00299 241 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 WWP2O00308 870 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 RFPL3O75679 317 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 PPM1BO75688 479 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 PDE9AO76083 593 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 IFNA14P01570 189 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 ATP1B1P05026 303 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 ANKRD34CP0C6C1 535 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 NCF1P14598 390 aaPredicted RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 CD27P26842 260 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 CMPK1P30085 196 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 KDELR2P33947 212 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 RPS19P39019 145 aaKnown RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 DGKQP52824 942 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 RRAS2P62070 204 aaPredicted RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 RPS13P62277 151 aaKnown RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 SGCGQ13326 291 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 QPRTQ15274 297 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 ANGPT1Q15389 498 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 ALG11Q2TAA5 492 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 PRTGQ2VWP7 1150 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 ZNF697Q5TEC3 545 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 ARSKQ6UWY0 536 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms