RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 CLCNKAP51800 687 aa14.56□□□□□ -0.08
PTBP1-204ENST00000394601 RRAS2P62070 204 aaPredicted RBP14.56□□□□□ -0.08
PTBP1-204ENST00000394601 ATAT1Q5SQI0 421 aa14.56□□□□□ -0.08
PTBP1-204ENST00000394601 SDR16C5Q8N3Y7 309 aa14.56□□□□□ -0.08
PTBP1-204ENST00000394601 TCEANCQ8N8B7 351 aa14.56□□□□□ -0.08
PTBP1-204ENST00000394601 UXS1Q8NBZ7 420 aa14.56□□□□□ -0.08
PTBP1-204ENST00000394601 SMARCD2Q92925 531 aa14.56□□□□□ -0.08
PTBP1-204ENST00000394601 RGMAQ96B86 450 aa14.56□□□□□ -0.08
PTBP1-204ENST00000394601 DPH7Q9BTV6 452 aa14.56□□□□□ -0.08
PTBP1-204ENST00000394601 LATO43561 262 aa14.56□□□□□ -0.08
PTBP1-204ENST00000394601 PEBP1P30086 187 aaKnown RBP14.56□□□□□ -0.08
PTBP1-204ENST00000394601 BCL6P41182 706 aa14.56□□□□□ -0.08
PTBP1-204ENST00000394601 SRP9P49458 86 aaKnown RBP14.56□□□□□ -0.08
PTBP1-204ENST00000394601 RGS1Q08116 209 aa14.56□□□□□ -0.08
PTBP1-204ENST00000394601 PIN1Q13526 163 aaPredicted RBP14.56□□□□□ -0.08
PTBP1-204ENST00000394601 CLVS2Q5SYC1 327 aa14.56□□□□□ -0.08
PTBP1-204ENST00000394601 CD300LDQ6UXZ3 194 aa14.56□□□□□ -0.08
PTBP1-204ENST00000394601 CREB3L2Q70SY1 520 aa14.56□□□□□ -0.08
PTBP1-204ENST00000394601 OR52P1PQ8NH57 321 aa14.56□□□□□ -0.08
PTBP1-204ENST00000394601 C9orf43Q8TAL5 461 aaPredicted RBP14.56□□□□□ -0.08
PTBP1-204ENST00000394601 PCBD2Q9H0N5 130 aa14.56□□□□□ -0.08
PTBP1-204ENST00000394601 OR51I1Q9H343 314 aa14.56□□□□□ -0.08
PTBP1-204ENST00000394601 NANSQ9NR45 359 aa14.56□□□□□ -0.08
PTBP1-204ENST00000394601 MRPL15Q9P015 296 aaKnown RBP14.56□□□□□ -0.08
PTBP1-204ENST00000394601 CHST2Q9Y4C5 530 aa14.56□□□□□ -0.08
PTBP1-204ENST00000394601 PLEKHM1Q9Y4G2 1056 aa14.56□□□□□ -0.08
PTBP1-204ENST00000394601 ASB4Q9Y574 426 aa14.56□□□□□ -0.08
PTBP1-204ENST00000394601 A0A0G2JN53 185 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 TLR4O00206 839 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 FAAHO00519 579 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 MID1O15344 667 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 OR1F1O43749 312 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 SSNA1O43805 119 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 CFDP00746 253 aaPredicted RBP14.55□□□□□ -0.08
PTBP1-204ENST00000394601 SCG5P05408 212 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 EPHX1P07099 455 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 CHRM4P08173 479 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 NAGAP17050 411 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 PTGER1P34995 402 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 GSTM5P46439 218 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 RPS5P46782 204 aaKnown RBP14.55□□□□□ -0.08
PTBP1-204ENST00000394601 SNRPNP63162 240 aaKnown RBP14.55□□□□□ -0.08
PTBP1-204ENST00000394601 PRDX1Q06830 199 aaKnown RBP14.55□□□□□ -0.08
PTBP1-204ENST00000394601 EXOSC2Q13868 293 aaKnown RBP14.55□□□□□ -0.08
PTBP1-204ENST00000394601 NDUFAF5Q5TEU4 345 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 RNLSQ5VYX0 342 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 MRM1Q6IN84 353 aaKnown RBP14.55□□□□□ -0.08
PTBP1-204ENST00000394601 COQ8AQ8NI60 647 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 ST8SIA4Q92187 359 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 ARMC5Q96C12 935 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 NARS2Q96I59 477 aaKnown RBP14.55□□□□□ -0.08
PTBP1-204ENST00000394601 MACROD1Q9BQ69 325 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 SPRTNQ9H040 489 aaPredicted RBP14.55□□□□□ -0.08
PTBP1-204ENST00000394601 MIXL1Q9H2W2 232 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 TRPV4Q9HBA0 871 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 SLC6A20Q9NP91 592 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 CES1P1Q9UKY3 287 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 MGAT4BQ9UQ53 548 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 A0A1W2PRQ8 180 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 AKAP8O43823 692 aaKnown RBP14.55□□□□□ -0.08
PTBP1-204ENST00000394601 CSO75390 466 aaKnown RBP14.55□□□□□ -0.08
PTBP1-204ENST00000394601 CLEC3AO75596 197 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 HBQ1P09105 142 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 TRA2BP62995 288 aaKnown RBP14.55□□□□□ -0.08
PTBP1-204ENST00000394601 TEX261Q6UWH6 196 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 ZER1Q7Z7L7 766 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 LUZP2Q86TE4 346 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 KIF18BQ86Y91 864 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 HERVK_113Q902F9 699 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 DCLRE1CQ96SD1 692 aaKnown RBP14.55□□□□□ -0.08
PTBP1-204ENST00000394601 PRDM7Q9NQW5 492 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 ENOPH1Q9UHY7 261 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 NCKAP1Q9Y2A7 1128 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 U3KQ87 197 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 TRIM77I1YAP6 450 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 M0R3H8 397 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 RFPL3O75679 317 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 APOC3P02656 99 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 H1F0P07305 194 aaKnown RBP14.55□□□□□ -0.08
PTBP1-204ENST00000394601 CRYBB2P43320 205 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 IRF4Q15306 451 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 ZNF750Q32MQ0 723 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 TANGO2Q6ICL3 276 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 TMEM81Q6P7N7 255 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 VITQ6UXI7 678 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 PIAS4Q8N2W9 510 aaPredicted RBP14.55□□□□□ -0.08
PTBP1-204ENST00000394601 TMEM145Q8NBT3 493 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 SETD6Q8TBK2 473 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 HMGB4Q8WW32 186 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 XKR8Q9H6D3 395 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 ANKRA2Q9H9E1 313 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 C12orf10Q9HB07 376 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 KCNE3Q9Y6H6 103 aa14.55□□□□□ -0.08
PTBP1-204ENST00000394601 MN1Q10571 1320 aaPredicted RBP14.54□□□□□ -0.08
PTBP1-204ENST00000394601 TP53BP1Q12888 1972 aaPredicted RBP14.54□□□□□ -0.08
PTBP1-204ENST00000394601 PGRMC2O15173 223 aa14.54□□□□□ -0.08
PTBP1-204ENST00000394601 CXCL3P19876 107 aa14.54□□□□□ -0.08
PTBP1-204ENST00000394601 GJA4P35212 333 aa14.54□□□□□ -0.08
PTBP1-204ENST00000394601 AANATQ16613 207 aa14.54□□□□□ -0.08
PTBP1-204ENST00000394601 SLC25A30Q5SVS4 291 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms