RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 ZNF791Q3KP31 576 aaPredicted RBP9.91□□□□□ -0.82
CALD1-203ENST00000393118 PRSS36Q5K4E3 855 aa9.91□□□□□ -0.82
CALD1-203ENST00000393118 B3GLCTQ6Y288 498 aa9.91□□□□□ -0.82
CALD1-203ENST00000393118 ASB18Q6ZVZ8 466 aa9.91□□□□□ -0.82
CALD1-203ENST00000393118 LRRC25Q8N386 305 aaPredicted RBP9.91□□□□□ -0.82
CALD1-203ENST00000393118 AMER3Q8N944 861 aa9.91□□□□□ -0.82
CALD1-203ENST00000393118 ARSGQ96EG1 525 aa9.91□□□□□ -0.82
CALD1-203ENST00000393118 AMDHD1Q96NU7 426 aa9.91□□□□□ -0.82
CALD1-203ENST00000393118 SECISBP2Q96T21 854 aaKnown RBP9.91□□□□□ -0.82
CALD1-203ENST00000393118 GTPBP2Q9BX10 602 aaKnown RBP9.91□□□□□ -0.82
CALD1-203ENST00000393118 STARD5Q9NSY2 213 aa9.91□□□□□ -0.82
CALD1-203ENST00000393118 SPHK1Q9NYA1 384 aa9.91□□□□□ -0.82
CALD1-203ENST00000393118 CSNK1G3Q9Y6M4 447 aa9.91□□□□□ -0.82
CALD1-203ENST00000393118 ANKRD36A6QL64 1941 aa9.91□□□□□ -0.82
CALD1-203ENST00000393118 IRGMA1A4Y4 181 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 H0Y8X5 98 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 DHFRP00374 187 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 GNSP15586 552 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 ELAVL4P26378 380 aaKnown RBP9.9□□□□□ -0.82
CALD1-203ENST00000393118 GZMMP51124 257 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 GALK2Q01415 458 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 TMEM52BQ4KMG9 183 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 OR2G6Q5TZ20 316 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 FAHD1Q6P587 224 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 ADAMTSL4Q6UY14 1074 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 SLC36A4Q6YBV0 504 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 IDO2Q6ZQW0 420 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 ABHD13Q7L211 337 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 DGLUCYQ7Z3D6 616 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 SAMD14Q8IZD0 417 aaPredicted RBP9.9□□□□□ -0.82
CALD1-203ENST00000393118 ESX1Q8N693 406 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 OR8K3Q8NH51 312 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 OR4C6Q8NH72 309 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 UCN3Q969E3 161 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 GABARAPL1Q9H0R8 117 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 NKX2-4Q9H2Z4 354 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 THAP10Q9P2Z0 257 aaPredicted RBP9.9□□□□□ -0.82
CALD1-203ENST00000393118 PHF11Q9UIL8 331 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 FAM183AA6NL82 134 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 RIIAD1A6NNX1 92 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 ARHGAP33O14559 1287 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 GKN3PP0CG01 181 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 CBLP22681 906 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 MTNR1AP48039 350 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 DPTQ07507 201 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 RPE65Q16518 533 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 CDONQ4KMG0 1287 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 IDNKQ5T6J7 187 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 FBXO15Q8NCQ5 510 aaPredicted RBP9.9□□□□□ -0.82
CALD1-203ENST00000393118 NEDD4LQ96PU5 975 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 FGF22Q9HCT0 170 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 PPIEQ9UNP9 301 aaKnown RBP9.9□□□□□ -0.82
CALD1-203ENST00000393118 BRWD1Q9NSI6 2320 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 HMX3A6NHT5 357 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 CLDN24A6NM45 220 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 JUNDP17535 347 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 ACADLP28330 430 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 SSTR4P31391 388 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 GABRA3P34903 492 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 GIPRP48546 466 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 FBXW4P57775 412 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 SHC2P98077 582 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 FLYWCH1Q4VC44 716 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 PIP5KL1Q5T9C9 394 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 FAM109BQ6ICB4 259 aaPredicted RBP9.9□□□□□ -0.82
CALD1-203ENST00000393118 MZT2AQ6P582 158 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 RNF165Q6ZSG1 346 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 PDXPQ96GD0 296 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 AHCYL2Q96HN2 611 aaKnown RBP9.9□□□□□ -0.82
CALD1-203ENST00000393118 BEX1Q9HBH7 125 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 MCCC2Q9HCC0 563 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 SMURF1Q9HCE7 757 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 NLKQ9UBE8 527 aa9.9□□□□□ -0.82
CALD1-203ENST00000393118 MRPS33Q9Y291 106 aaKnown RBP9.9□□□□□ -0.82
CALD1-203ENST00000393118 HMGN4O00479 90 aa9.9□□□□□ -0.83
CALD1-203ENST00000393118 AKR7A2O43488 359 aa9.9□□□□□ -0.83
CALD1-203ENST00000393118 CHST10O43529 356 aa9.9□□□□□ -0.83
CALD1-203ENST00000393118 SLC2A2P11168 524 aaPredicted RBP9.9□□□□□ -0.83
CALD1-203ENST00000393118 ATP5A1P25705 553 aaKnown RBP9.9□□□□□ -0.83
CALD1-203ENST00000393118 REEP5Q00765 189 aa9.9□□□□□ -0.83
CALD1-203ENST00000393118 SLC3A1Q07837 685 aa9.9□□□□□ -0.83
CALD1-203ENST00000393118 TOR2AQ5JU69 321 aa9.9□□□□□ -0.83
CALD1-203ENST00000393118 TCTN3Q6NUS6 607 aa9.9□□□□□ -0.83
CALD1-203ENST00000393118 ZNF613Q6PF04 617 aa9.9□□□□□ -0.83
CALD1-203ENST00000393118 OR2L3Q8NG85 312 aa9.9□□□□□ -0.83
CALD1-203ENST00000393118 ZNF707Q96C28 371 aaPredicted RBP9.9□□□□□ -0.83
CALD1-203ENST00000393118 DNAJA3Q96EY1 480 aa9.9□□□□□ -0.83
CALD1-203ENST00000393118 OR7D2Q96RA2 312 aa9.9□□□□□ -0.83
CALD1-203ENST00000393118 CD180Q99467 661 aa9.9□□□□□ -0.83
CALD1-203ENST00000393118 IL21RQ9HBE5 538 aa9.9□□□□□ -0.83
CALD1-203ENST00000393118 ANKHQ9HCJ1 492 aa9.9□□□□□ -0.83
CALD1-203ENST00000393118 PCM1Q15154 2024 aa9.89□□□□□ -0.83
CALD1-203ENST00000393118 LRIT2A6NDA9 550 aa9.89□□□□□ -0.83
CALD1-203ENST00000393118 POM121BA6NF01 834 aa9.89□□□□□ -0.83
CALD1-203ENST00000393118 SDC2P34741 201 aa9.89□□□□□ -0.83
CALD1-203ENST00000393118 BSGP35613 385 aa9.89□□□□□ -0.83
CALD1-203ENST00000393118 SKP1P63208 163 aa9.89□□□□□ -0.83
CALD1-203ENST00000393118 GBX1Q14549 363 aa9.89□□□□□ -0.83
CALD1-203ENST00000393118 PARM1Q6UWI2 310 aa9.89□□□□□ -0.83
CALD1-203ENST00000393118 SLC16A12Q6ZSM3 486 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms