RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 APOBEC3BQ9UH17 382 aaKnown RBP17.8■□□□□ 0.44
CCDC50-202ENST00000392456 HEBP2Q9Y5Z4 205 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 PLXND1Q9Y4D7 1925 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 A0A1W2PPL8 197 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 CTSEP14091 401 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 CCR8P51685 355 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 IL5RAQ01344 420 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 COL9A2Q14055 689 aaPredicted RBP17.8■□□□□ 0.44
CCDC50-202ENST00000392456 LARS2Q15031 903 aaKnown RBP17.8■□□□□ 0.44
CCDC50-202ENST00000392456 GPR155Q7Z3F1 870 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 ADGRF3Q8IZF5 1079 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 RAB42Q8N4Z0 105 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 DNAJB14Q8TBM8 379 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 FCRL1Q96LA6 429 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 MACROD1Q9BQ69 325 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 RHNO1Q9BSD3 238 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 GSX2Q9BZM3 304 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 CLMPQ9H6B4 373 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 LYARQ9NX58 379 aaKnown RBP17.8■□□□□ 0.44
CCDC50-202ENST00000392456 SCN3BQ9NY72 215 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 MGAT4BQ9UQ53 548 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 PCDHB11Q9Y5F2 797 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 SESN1Q9Y6P5 492 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 A0A075B6Q4 140 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 TUBAL3A6NHL2 446 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 EFCAB7A8K855 629 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 M0R082 166 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 FOXE1O00358 373 aaPredicted RBP17.79■□□□□ 0.44
CCDC50-202ENST00000392456 NOBOXO60393 691 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 KLHL18O94889 574 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 H2AFB1P0C5Y9 115 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 H2AFB2P0C5Z0 115 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 SOX6P35712 828 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 CSNK1EP49674 416 aaKnown RBP17.79■□□□□ 0.44
CCDC50-202ENST00000392456 CLDN8P56748 225 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 FGFBP1Q14512 234 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 RABL3Q5HYI8 236 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 COQ5Q5HYK3 327 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 ZC3H12BQ5HYM0 836 aaKnown RBP17.79■□□□□ 0.44
CCDC50-202ENST00000392456 KIAA1614Q5VZ46 1190 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 SLC27A4Q6P1M0 643 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 CEP68Q76N32 757 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 MAMDC2Q7Z304 686 aaPredicted RBP17.79■□□□□ 0.44
CCDC50-202ENST00000392456 OR2L3Q8NG85 312 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 SLC37A2Q8TED4 501 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 TSPEARQ8WU66 669 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 TMEM74Q96NL1 305 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 PCBD2Q9H0N5 130 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 BIN3Q9NQY0 253 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.79■□□□□ 0.44
CCDC50-202ENST00000392456 RPS6KA6Q9UK32 745 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 V9GYQ6 96 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 G3V2T6 193 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 TLR4O00206 839 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 SLC16A6O15403 523 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 FABP7O15540 132 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 SEC14L5O43304 696 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 RPLP0P05388 317 aaKnown RBP17.79■□□□□ 0.44
CCDC50-202ENST00000392456 CHRM5P08912 532 aaPredicted RBP17.79■□□□□ 0.44
CCDC50-202ENST00000392456 AZGP1P25311 298 aaKnown RBP17.79■□□□□ 0.44
CCDC50-202ENST00000392456 CXCR4P61073 352 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 SRSF5Q13243 272 aaKnown RBP17.79■□□□□ 0.44
CCDC50-202ENST00000392456 ANKRD34AQ69YU3 496 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 ELP4Q96EB1 424 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 PAPOLGQ9BWT3 736 aaKnown RBP17.79■□□□□ 0.44
CCDC50-202ENST00000392456 IL1RAPQ9NPH3 570 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 KIF25Q9UIL4 384 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 MGAT4AQ9UM21 535 aa17.79■□□□□ 0.44
CCDC50-202ENST00000392456 EFCAB10A6NFE3 127 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 TTLL8A6PVC2 850 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 ISM1B1AKI9 464 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 STMND1H3BQB6 276 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 PPM1DO15297 605 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 OR1F1O43749 312 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 ACAA1P09110 424 aaPredicted RBP17.78■□□□□ 0.44
CCDC50-202ENST00000392456 HSD3B1P14060 373 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 HSD3B2P26439 372 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 LIPEQ05469 1076 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 NFYCQ13952 458 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 DSG2Q14126 1118 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 SOWAHCQ53LP3 525 aaPredicted RBP17.78■□□□□ 0.44
CCDC50-202ENST00000392456 ATRAIDQ6UW56 229 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 DLEU7Q6UYE1 221 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 COMMD6Q7Z4G1 85 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 SRFBP1Q8NEF9 429 aaKnown RBP17.78■□□□□ 0.44
CCDC50-202ENST00000392456 FAM46DQ8NEK8 389 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 PPM1MQ96MI6 270 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 KCNS3Q9BQ31 491 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 AIF1LQ9BQI0 150 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 DPH7Q9BTV6 452 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 GSDMCQ9BYG8 508 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 SRMSQ9H3Y6 488 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 PELI2Q9HAT8 420 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 C3orf14Q9HBI5 128 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 CCNB1IP1Q9NPC3 277 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 SLC6A13Q9NSD5 602 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 LEF1Q9UJU2 399 aaPredicted RBP17.78■□□□□ 0.44
CCDC50-202ENST00000392456 ADAM30Q9UKF2 790 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 PCDHB14Q9Y5E9 798 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 RTCAO00442 366 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms