RNA–Protein interactions for RNA: ENST00000392415.6

UBE2E3-201, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene UBE2E3, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-201ENST00000392415 PDCD2Q16342 344 aaPredicted RBP18.71■□□□□ 0.59
UBE2E3-201ENST00000392415 EXOSC6Q5RKV6 272 aaKnown RBP18.71■□□□□ 0.59
UBE2E3-201ENST00000392415 MFSD12Q6NUT3 480 aa18.71■□□□□ 0.59
UBE2E3-201ENST00000392415 SZRD1Q7Z422 152 aa18.71■□□□□ 0.59
UBE2E3-201ENST00000392415 GDF7Q7Z4P5 450 aa18.71■□□□□ 0.59
UBE2E3-201ENST00000392415 IFNEQ86WN2 208 aa18.71■□□□□ 0.59
UBE2E3-201ENST00000392415 LACC1Q8IV20 430 aa18.71■□□□□ 0.59
UBE2E3-201ENST00000392415 LIX1LQ8IVB5 337 aa18.71■□□□□ 0.59
UBE2E3-201ENST00000392415 TRIM42Q8IWZ5 723 aa18.71■□□□□ 0.59
UBE2E3-201ENST00000392415 FADS6Q8N9I5 356 aa18.71■□□□□ 0.59
UBE2E3-201ENST00000392415 PSMA8Q8TAA3 256 aa18.71■□□□□ 0.59
UBE2E3-201ENST00000392415 NUDT8Q8WV74 236 aa18.71■□□□□ 0.59
UBE2E3-201ENST00000392415 FAM120BQ96EK7 910 aaKnown RBP18.71■□□□□ 0.59
UBE2E3-201ENST00000392415 PRPF18Q99633 342 aaKnown RBP18.71■□□□□ 0.59
UBE2E3-201ENST00000392415 TRIM8Q9BZR9 551 aa18.71■□□□□ 0.59
UBE2E3-201ENST00000392415 AKTIPQ9H8T0 292 aa18.71■□□□□ 0.59
UBE2E3-201ENST00000392415 NPDC1Q9NQX5 325 aaPredicted RBP18.71■□□□□ 0.59
UBE2E3-201ENST00000392415 SDHAF3Q9NRP4 125 aa18.71■□□□□ 0.59
UBE2E3-201ENST00000392415 ATAD3AQ9NVI7 634 aa18.71■□□□□ 0.59
UBE2E3-201ENST00000392415 TAS2R10Q9NYW0 307 aa18.71■□□□□ 0.59
UBE2E3-201ENST00000392415 KIAA1549Q9HCM3 1950 aa18.7■□□□□ 0.58
UBE2E3-201ENST00000392415 C17orf51A8MQB3 221 aa18.7■□□□□ 0.58
UBE2E3-201ENST00000392415 KDM4EB2RXH2 506 aaPredicted RBP18.7■□□□□ 0.58
UBE2E3-201ENST00000392415 SCO2O43819 266 aa18.7■□□□□ 0.58
UBE2E3-201ENST00000392415 IGKV1D-16P01601 117 aa18.7■□□□□ 0.58
UBE2E3-201ENST00000392415 ACP2P11117 423 aa18.7■□□□□ 0.58
UBE2E3-201ENST00000392415 CPN1P15169 458 aa18.7■□□□□ 0.58
UBE2E3-201ENST00000392415 DPP4P27487 766 aa18.7■□□□□ 0.58
UBE2E3-201ENST00000392415 MSX1P28360 303 aa18.7■□□□□ 0.58
UBE2E3-201ENST00000392415 CEACAM8P31997 349 aaPredicted RBP18.7■□□□□ 0.58
UBE2E3-201ENST00000392415 TIMP3P35625 211 aa18.7■□□□□ 0.58
UBE2E3-201ENST00000392415 RFX3P48380 749 aa18.7■□□□□ 0.58
UBE2E3-201ENST00000392415 NSUN5P2Q63ZY6 315 aa18.7■□□□□ 0.58
UBE2E3-201ENST00000392415 ZNF295-AS1Q8N0V1 137 aa18.7■□□□□ 0.58
UBE2E3-201ENST00000392415 SLC16A11Q8NCK7 471 aa18.7■□□□□ 0.58
UBE2E3-201ENST00000392415 OR4K17Q8NGC6 315 aa18.7■□□□□ 0.58
UBE2E3-201ENST00000392415 ZPLD1Q8TCW7 415 aa18.7■□□□□ 0.58
UBE2E3-201ENST00000392415 OR5P2Q8WZ92 322 aa18.7■□□□□ 0.58
UBE2E3-201ENST00000392415 SLC9A6Q92581 669 aa18.7■□□□□ 0.58
UBE2E3-201ENST00000392415 RMND5BQ96G75 393 aaPredicted RBP18.7■□□□□ 0.58
UBE2E3-201ENST00000392415 RTN4RQ9BZR6 473 aa18.7■□□□□ 0.58
UBE2E3-201ENST00000392415 NOP53Q9NZM5 478 aaKnown RBP18.7■□□□□ 0.58
UBE2E3-201ENST00000392415 PPP4R1LQ9P1A2 415 aa18.7■□□□□ 0.58
UBE2E3-201ENST00000392415 DOCK7Q96N67 2140 aa18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 TMEM120BA0PK00 339 aa18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 CD8B2A6NJW9 211 aa18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 HSPB2A8KAH6 182 aa18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 ZIC3O60481 467 aa18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 CLK3P49761 638 aaKnown RBP18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 SLC18A1P54219 525 aa18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 DIO3P55073 304 aa18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 DSCR4P56555 118 aaPredicted RBP18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 CLDN8P56748 225 aa18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 WDR4P57081 412 aaKnown RBP18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 BST1Q10588 318 aa18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 HSPB2Q16082 182 aa18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 DUSP5Q16690 384 aa18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 HHATQ5VTY9 493 aa18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 ENPP6Q6UWR7 440 aa18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 MEX3BQ6ZN04 569 aaKnown RBP18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 CAMKMTQ7Z624 323 aa18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 ANKRD42Q8N9B4 389 aa18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 TNIP2Q8NFZ5 429 aa18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 OR2M3Q8NG83 312 aa18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 FAM110BQ8TC76 370 aa18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 C16orf58Q96GQ5 468 aa18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 PPP1R36Q96LQ0 422 aa18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 PAIP2Q9BPZ3 127 aaKnown RBP18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 BHLHE41Q9C0J9 482 aaPredicted RBP18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 DSN1Q9H410 356 aa18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 ZCCHC3Q9NUD5 404 aaKnown RBP18.69■□□□□ 0.58
UBE2E3-201ENST00000392415 MYO9AB2RTY4 2548 aa18.68■□□□□ 0.58
UBE2E3-201ENST00000392415 UTS2O95399 124 aa18.68■□□□□ 0.58
UBE2E3-201ENST00000392415 CHMP24386 653 aa18.68■□□□□ 0.58
UBE2E3-201ENST00000392415 PRIM2P49643 509 aa18.68■□□□□ 0.58
UBE2E3-201ENST00000392415 SLC25A35Q3KQZ1 300 aa18.68■□□□□ 0.58
UBE2E3-201ENST00000392415 GRAMD1BQ3KR37 738 aa18.68■□□□□ 0.58
UBE2E3-201ENST00000392415 LSM12Q3MHD2 195 aaKnown RBP18.68■□□□□ 0.58
UBE2E3-201ENST00000392415 AAGABQ6PD74 315 aa18.68■□□□□ 0.58
UBE2E3-201ENST00000392415 APOOLQ6UXV4 268 aa18.68■□□□□ 0.58
UBE2E3-201ENST00000392415 MARCH3Q86UD3 253 aa18.68■□□□□ 0.58
UBE2E3-201ENST00000392415 NAXEQ8NCW5 288 aa18.68■□□□□ 0.58
UBE2E3-201ENST00000392415 FBXO30Q8TB52 745 aa18.68■□□□□ 0.58
UBE2E3-201ENST00000392415 DUSP19Q8WTR2 217 aa18.68■□□□□ 0.58
UBE2E3-201ENST00000392415 DUSP26Q9BV47 211 aa18.68■□□□□ 0.58
UBE2E3-201ENST00000392415 CALHM2Q9HA72 323 aa18.68■□□□□ 0.58
UBE2E3-201ENST00000392415 DKKL1Q9UK85 242 aa18.68■□□□□ 0.58
UBE2E3-201ENST00000392415 PDZD2O15018 2839 aa18.67■□□□□ 0.58
UBE2E3-201ENST00000392415 MBD3L4A6NDZ8 208 aaPredicted RBP18.67■□□□□ 0.58
UBE2E3-201ENST00000392415 MBD3L3A6NE82 208 aaPredicted RBP18.67■□□□□ 0.58
UBE2E3-201ENST00000392415 MBD3L5A6NJ08 208 aaPredicted RBP18.67■□□□□ 0.58
UBE2E3-201ENST00000392415 KCNK2O95069 426 aa18.67■□□□□ 0.58
UBE2E3-201ENST00000392415 C6orf47O95873 294 aa18.67■□□□□ 0.58
UBE2E3-201ENST00000392415 HMGN2P05204 90 aaKnown RBP18.67■□□□□ 0.58
UBE2E3-201ENST00000392415 ALOX5P09917 674 aa18.67■□□□□ 0.58
UBE2E3-201ENST00000392415 CCT3P49368 545 aaKnown RBP18.67■□□□□ 0.58
UBE2E3-201ENST00000392415 LHX2P50458 406 aa18.67■□□□□ 0.58
UBE2E3-201ENST00000392415 WNT3P56703 355 aa18.67■□□□□ 0.58
UBE2E3-201ENST00000392415 B3GALT5-AS1P59052 145 aa18.67■□□□□ 0.58
UBE2E3-201ENST00000392415 RCAN2Q14206 197 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms