RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 SYNPO2LQ9H987 977 aa16.87■□□□□ 0.29
ERCC2-201ENST00000391941 FBXL4Q9UKA2 621 aa16.87■□□□□ 0.29
ERCC2-201ENST00000391941 LIPT1Q9Y234 373 aa16.87■□□□□ 0.29
ERCC2-201ENST00000391941 PCDHGB7Q9Y5F8 929 aa16.87■□□□□ 0.29
ERCC2-201ENST00000391941 PLXNA2O75051 1894 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 TRDV1A0A1B0GX56 115 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 GYPBP06028 91 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 C8AP07357 584 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 BTCP35070 178 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 DEFB103AP81534 67 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 CAMK1Q14012 370 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 ZNF267Q14586 743 aaPredicted RBP16.86■□□□□ 0.29
ERCC2-201ENST00000391941 ZNF697Q5TEC3 545 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 CD200R1LQ6Q8B3 271 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 C17orf64Q86WR6 236 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 LGR4Q9BXB1 951 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 MED28Q9H204 178 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 SLCO1C1Q9NYB5 712 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 SPTBP11277 2137 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 SSR2P43308 183 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 VSX2P58304 361 aaPredicted RBP16.86■□□□□ 0.29
ERCC2-201ENST00000391941 SF3A2Q15428 464 aaKnown RBP16.86■□□□□ 0.29
ERCC2-201ENST00000391941 ZNF805Q5CZA5 627 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 ZNF311Q5JNZ3 666 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 DPPA4Q7L190 304 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 IRF7Q92985 503 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 UBE2E3Q969T4 207 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 MSANTD3Q96H12 275 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 ZSWIM3Q96MP5 696 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 BBS4Q96RK4 519 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 C11orf49Q9H6J7 331 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 ZFP64Q9NPA5 681 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 AHSPQ9NZD4 102 aa16.86■□□□□ 0.29
ERCC2-201ENST00000391941 ZIC2O95409 532 aaPredicted RBP16.85■□□□□ 0.29
ERCC2-201ENST00000391941 KELP23276 732 aa16.85■□□□□ 0.29
ERCC2-201ENST00000391941 GIFP27352 417 aa16.85■□□□□ 0.29
ERCC2-201ENST00000391941 RPA4Q13156 261 aa16.85■□□□□ 0.29
ERCC2-201ENST00000391941 ENTPD8Q5MY95 495 aa16.85■□□□□ 0.29
ERCC2-201ENST00000391941 CEP76Q8TAP6 659 aa16.85■□□□□ 0.29
ERCC2-201ENST00000391941 CD99L2Q8TCZ2 262 aa16.85■□□□□ 0.29
ERCC2-201ENST00000391941 SMG7Q92540 1137 aaKnown RBP16.85■□□□□ 0.29
ERCC2-201ENST00000391941 TFGQ92734 400 aaPredicted RBP16.85■□□□□ 0.29
ERCC2-201ENST00000391941 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.85■□□□□ 0.292e-6■■■■□ 20.3
ERCC2-201ENST00000391941 MRPS18AQ9NVS2 196 aaKnown RBP16.85■□□□□ 0.29
ERCC2-201ENST00000391941 ABT1Q9ULW3 272 aaKnown RBP16.85■□□□□ 0.29
ERCC2-201ENST00000391941 COL4A3Q01955 1670 aa16.85■□□□□ 0.29
ERCC2-201ENST00000391941 OBSL1O75147 1896 aa16.85■□□□□ 0.29
ERCC2-201ENST00000391941 MTCL1Q9Y4B5 1905 aaKnown RBP16.85■□□□□ 0.29
ERCC2-201ENST00000391941 CFDP00746 253 aaPredicted RBP16.85■□□□□ 0.29
ERCC2-201ENST00000391941 ADAM15Q13444 863 aa16.85■□□□□ 0.29
ERCC2-201ENST00000391941 AGERQ15109 404 aa16.85■□□□□ 0.29
ERCC2-201ENST00000391941 NDUFA9Q16795 377 aa16.85■□□□□ 0.29
ERCC2-201ENST00000391941 LYPD4Q6UWN0 246 aa16.85■□□□□ 0.29
ERCC2-201ENST00000391941 C12orf40Q86WS4 652 aa16.85■□□□□ 0.29
ERCC2-201ENST00000391941 KRT78Q8N1N4 520 aa16.85■□□□□ 0.29
ERCC2-201ENST00000391941 C17orf47Q8NEP4 570 aa16.85■□□□□ 0.29
ERCC2-201ENST00000391941 COL26A1Q96A83 441 aa16.85■□□□□ 0.29
ERCC2-201ENST00000391941 PRRC1Q96M27 445 aa16.85■□□□□ 0.29
ERCC2-201ENST00000391941 GTPBP2Q9BX10 602 aaKnown RBP16.85■□□□□ 0.29
ERCC2-201ENST00000391941 NFKBIL1Q9UBC1 381 aaPredicted RBP16.85■□□□□ 0.29
ERCC2-201ENST00000391941 ATG4BQ9Y4P1 393 aa16.85■□□□□ 0.29
ERCC2-201ENST00000391941 NDUFS4O43181 175 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 SLC43A1O75387 559 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 ACADLP28330 430 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 PPP2R1BP30154 601 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 MC3RP41968 323 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 RPL6Q02878 288 aaKnown RBP16.84■□□□□ 0.29
ERCC2-201ENST00000391941 SREBF2Q12772 1141 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 NTRK2Q16620 822 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 ZSWIM7Q19AV6 140 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 RFLNBQ8N5W9 214 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 CYB561A3Q8NBI2 242 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 OR10H4Q8NGA5 316 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 SLC38A2Q96QD8 506 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 NLGN3Q9NZ94 848 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 EXOSC1Q9Y3B2 195 aaKnown RBP16.84■□□□□ 0.29
ERCC2-201ENST00000391941 KNL1Q8NG31 2342 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 MT-ND4P03905 459 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 HLA-DPB1P04440 258 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 PRKACBP22694 351 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 CRYZQ08257 329 aaKnown RBP16.84■□□□□ 0.29
ERCC2-201ENST00000391941 DUSP6Q16828 381 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 ESCO2Q56NI9 601 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 CCNJQ5T5M9 372 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 ZBTB37Q5TC79 503 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 KIAA1211LQ6NV74 962 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 ZNF322Q6U7Q0 402 aaPredicted RBP16.84■□□□□ 0.29
ERCC2-201ENST00000391941 CREB3L2Q70SY1 520 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 ZNF680Q8NEM1 530 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 CNRIP1Q96F85 164 aaPredicted RBP16.84■□□□□ 0.29
ERCC2-201ENST00000391941 C12orf66Q96MD2 445 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 OR51V1Q9H2C8 321 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 FLVCR2Q9UPI3 526 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 LAMA1P25391 3075 aa16.84■□□□□ 0.29
ERCC2-201ENST00000391941 CXorf51AA0A1B0GTR3 108 aa16.83■□□□□ 0.29
ERCC2-201ENST00000391941 SURF4O15260 269 aa16.83■□□□□ 0.29
ERCC2-201ENST00000391941 TRIM3O75382 744 aaPredicted RBP16.83■□□□□ 0.29
ERCC2-201ENST00000391941 C6P13671 934 aa16.83■□□□□ 0.29
ERCC2-201ENST00000391941 SLC6A1P30531 599 aa16.83■□□□□ 0.29
ERCC2-201ENST00000391941 PER3P56645 1201 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms