RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 SMG6Q86US8 1419 aaKnown RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SETD5Q9C0A6 1442 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ATP10DQ9P241 1426 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 LRRK2Q5S007 2527 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SSC5DA1L4H1 1573 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ADGRB1O14514 1584 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 GLI3P10071 1580 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ADAMTS12P58397 1594 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 NEURL4Q96JN8 1562 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 BICRAQ9NZM4 1560 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 MAP1AP78559 2803 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 AKAP13Q12802 2813 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 LTBP1Q14766 1721 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CDC42BPBQ9Y5S2 1711 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SPEGQ15772 3267 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 NOTCH4Q99466 2003 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 PRRC2AP48634 2157 aaKnown RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 FLNBO75369 2602 aaKnown RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ITPR1Q14643 2758 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 TEX15Q9BXT5 2789 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CPDO75976 1380 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 KDRP35968 1356 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CNTNAP1P78357 1384 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 TMEM94Q12767 1356 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 KANK1Q14678 1352 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 GPRASP1Q5JY77 1395 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 KIF24Q5T7B8 1368 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 PNPLA6Q8IY17 1366 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 TDRD9Q8NDG6 1382 aaKnown RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 TONSLQ96HA7 1378 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ABCC12Q96J65 1359 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 RAB3GAP2Q9H2M9 1393 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 PLEKHG2Q9H7P9 1386 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 PLEKHG1Q9ULL1 1385 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 PLEKHH1Q9ULM0 1364 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SLIT1O75093 1534 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 MAP3K1Q13233 1512 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ARAP3Q8WWN8 1544 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 TULP4Q9NRJ4 1543 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF608Q9ULD9 1512 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 NISCHQ9Y2I1 1504 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ADAMTSL3P82987 1691 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 COL4A6Q14031 1691 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF646O15015 1829 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 LTBP2Q14767 1821 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CFAP46Q8IYW2 2715 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 PRRC2CQ9Y520 2896 aaKnown RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 DMXL1Q9Y485 3027 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SZT2Q5T011 3432 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NIPBLQ6KC79 2804 aaeCLIP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM186AA6NE01 2351 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SPTBN2O15020 2390 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GPR179Q6PRD1 2367 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 WNK1Q9H4A3 2382 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TRPM1Q7Z4N2 1603 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PTPN23Q9H3S7 1636 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PHRF1Q9P1Y6 1649 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SYNJ2O15056 1496 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ADGRL1O94910 1474 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NUP153P49790 1475 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GOLGA3Q08378 1498 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GRIN2BQ13224 1484 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NEO1Q92859 1461 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CECR2Q9BXF3 1484 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MROH7-TTC4A0A0A0MT08 1334 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PFASO15067 1338 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CLUHO75153 1309 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NFASCO94856 1347 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 UBE4BO95155 1302 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ACEP12821 1306 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PTPRJQ12913 1337 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 FRMPD4Q14CM0 1322 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MROH7Q68CQ1 1323 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RPGRIP1LQ68CZ1 1315 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ZBED9Q6R2W3 1325 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NPHP3Q7Z494 1330 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CDHR2Q9BYE9 1310 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF644Q9H582 1327 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF532Q9HCE3 1301 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 STK36Q9NRP7 1315 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RANBP2P49792 3224 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CEP295Q9C0D2 2601 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CEP290O15078 2479 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ROS1P08922 2347 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PCNX1Q96RV3 2341 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PLCE1Q9P212 2302 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PCNX3Q9H6A9 2034 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 COL27A1Q8IZC6 1860 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SHANK3Q9BYB0 1731 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 DSPP15924 2871 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 WDR87Q6ZQQ6 2873 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 UNC13BO14795 1591 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MED1Q15648 1581 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CEP170Q5SW79 1584 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CDC42BPGQ6DT37 1551 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 HECW2Q9P2P5 1572 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM208BQ5VWN6 2430 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SPG11Q96JI7 2443 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RTEL1-TNFRSF6BF6WH68 1400 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms