RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 MARCH1Q8TCQ1 289 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 BCL2L2Q92843 193 aaPredicted RBP1.85□□□□□ -2.11
TRAV40-201ENST00000390467 NEIL2Q969S2 332 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 PSMG2Q969U7 264 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 ATP6V1E2Q96A05 226 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 DEFB118Q96PH6 123 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 MRPL9Q9BYD2 267 aaKnown RBP1.85□□□□□ -2.11
TRAV40-201ENST00000390467 PNO1Q9NRX1 252 aaKnown RBP1.85□□□□□ -2.11
TRAV40-201ENST00000390467 COMMD8Q9NX08 183 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 HOXC10Q9NYD6 342 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 TRPC4Q9UBN4 977 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 LCMT1Q9UIC8 334 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 TRMT6Q9UJA5 497 aaKnown RBP1.85□□□□□ -2.11
TRAV40-201ENST00000390467 ZNF223Q9UK11 482 aaPredicted RBP1.85□□□□□ -2.11
TRAV40-201ENST00000390467 L3MBTL1Q9Y468 752 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 PPIAL4AQ9Y536 164 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 IKBKGQ9Y6K9 419 aa1.85□□□□□ -2.11
TRAV40-201ENST00000390467 USP6P35125 1406 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 ZNF320A2RRD8 509 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 NPIPA2E9PIF3 369 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 K7ENP7 123 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 PES1O00541 588 aaKnown RBP1.84□□□□□ -2.11
TRAV40-201ENST00000390467 ARPC1BO15143 372 aaKnown RBP1.84□□□□□ -2.11
TRAV40-201ENST00000390467 STSP08842 583 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 HIST1H2AGP0C0S8 130 aaPredicted RBP1.84□□□□□ -2.11
TRAV40-201ENST00000390467 MUTP22033 750 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 PITPNBP48739 271 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 HSD17B7P56937 341 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 PFN3P60673 137 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 OC90Q02509 493 aaPredicted RBP1.84□□□□□ -2.11
TRAV40-201ENST00000390467 TMED1Q13445 227 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 AARDQ4LEZ3 155 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 HSP90B2PQ58FF3 399 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 EOGTQ5NDL2 527 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 HECTD3Q5T447 861 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 HIST2H2AA3Q6FI13 130 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 OR5M10Q6IEU7 315 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 C16orf87Q6PH81 154 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 CWC27Q6UX04 472 aaKnown RBP1.84□□□□□ -2.11
TRAV40-201ENST00000390467 B3GLCTQ6Y288 498 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 BNIPLQ7Z465 357 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.84□□□□□ -2.11
TRAV40-201ENST00000390467 ALLCQ8N6M5 410 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 C20orf203Q8NBC4 194 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 NEIL3Q8TAT5 605 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 C7orf33Q8WU49 177 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 GIMAP1Q8WWP7 306 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 TMEM37Q8WXS4 190 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 N4BP2L2Q92802 583 aaPredicted RBP1.84□□□□□ -2.11
TRAV40-201ENST00000390467 HIST1H2ACQ93077 130 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 MYDGFQ969H8 173 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 CFAP36Q96G28 342 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 TMEM101Q96IK0 257 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 SMIM14Q96QK8 99 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 FAM114A2Q9NRY5 505 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 DCAF13Q9NV06 445 aaKnown RBP1.84□□□□□ -2.11
TRAV40-201ENST00000390467 EHFQ9NZC4 300 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 SUN2Q9UH99 717 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 PSG11Q9UQ72 335 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 DHRS7Q9Y394 339 aa1.84□□□□□ -2.11
TRAV40-201ENST00000390467 RRP15Q9Y3B9 282 aaKnown RBP1.84□□□□□ -2.11
TRAV40-201ENST00000390467 METP08581 1390 aa1.84□□□□□ -2.12
TRAV40-201ENST00000390467 IGKV2-28A0A075B6P5 120 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 TRBV6-6A0A0A6YYG2 114 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 ERICH4A6NGS2 130 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 TUBAL3A6NHL2 446 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 DHRS7CA6NNS2 312 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 FAM25EA8MYX2 175 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 TBL1XO60907 577 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 SCRG1O75711 98 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 BBOX1O75936 387 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 IGKV2D-28P01615 120 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 GSTA1P08263 222 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 IGFBP1P08833 259 aaPredicted RBP1.83□□□□□ -2.12
TRAV40-201ENST00000390467 HTR1FP30939 366 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 HPDP32754 393 aaPredicted RBP1.83□□□□□ -2.12
TRAV40-201ENST00000390467 CTNNB1P35222 781 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 CTRLP40313 264 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 CD86P42081 329 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 CCL11P51671 97 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 LIM2P55344 173 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 NME5P56597 212 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 NUP107P57740 925 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 EIF4EBP1Q13541 118 aaPredicted RBP1.83□□□□□ -2.12
TRAV40-201ENST00000390467 CYP51A1Q16850 503 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 KCTD19Q17RG1 926 aaPredicted RBP1.83□□□□□ -2.12
TRAV40-201ENST00000390467 DCST2Q5T1A1 773 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 GALNT17Q6IS24 598 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 SERPINA12Q8IW75 414 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 IQCF2Q8IXL9 164 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 MLKLQ8NB16 471 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 TAF4BQ92750 862 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 ITFG2Q969R8 447 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 TSGA13Q96PP4 275 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 NRTNQ99748 197 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 PAIP2Q9BPZ3 127 aaKnown RBP1.83□□□□□ -2.12
TRAV40-201ENST00000390467 AKIRIN1Q9H9L7 192 aaPredicted RBP1.83□□□□□ -2.12
TRAV40-201ENST00000390467 COPS7BQ9H9Q2 264 aaPredicted RBP1.83□□□□□ -2.12
TRAV40-201ENST00000390467 PIGVQ9NUD9 493 aa1.83□□□□□ -2.12
TRAV40-201ENST00000390467 ARGLU1Q9NWB6 273 aaPredicted RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms