RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 SLC41A2Q96JW4 573 aa23.42■■□□□ 1.34
SHOX2-201ENST00000389589 TMEM184BQ9Y519 407 aaPredicted RBP23.42■■□□□ 1.34
SHOX2-201ENST00000389589 SH3D21A4FU49 640 aa23.42■■□□□ 1.34
SHOX2-201ENST00000389589 H3BN98 237 aa23.42■■□□□ 1.34
SHOX2-201ENST00000389589 PRAMEF2O60811 474 aa23.42■■□□□ 1.34
SHOX2-201ENST00000389589 MT-ND2P03891 347 aa23.42■■□□□ 1.34
SHOX2-201ENST00000389589 MSL3P1P0C860 447 aa23.42■■□□□ 1.34
SHOX2-201ENST00000389589 EPHA8P29322 1005 aaPredicted RBP23.42■■□□□ 1.34
SHOX2-201ENST00000389589 CSF2RBP32927 897 aa23.42■■□□□ 1.34
SHOX2-201ENST00000389589 TRHRP34981 398 aaPredicted RBP23.42■■□□□ 1.34
SHOX2-201ENST00000389589 FIGNL1Q6PIW4 674 aa23.42■■□□□ 1.34
SHOX2-201ENST00000389589 PTCHD4Q6ZW05 846 aa23.42■■□□□ 1.34
SHOX2-201ENST00000389589 AHSA2Q719I0 299 aa23.42■■□□□ 1.34
SHOX2-201ENST00000389589 MED25Q71SY5 747 aa23.42■■□□□ 1.34
SHOX2-201ENST00000389589 RORBQ92753 470 aa23.42■■□□□ 1.34
SHOX2-201ENST00000389589 SIGLEC11Q96RL6 698 aa23.42■■□□□ 1.34
SHOX2-201ENST00000389589 PRR14Q9BWN1 585 aa23.42■■□□□ 1.34
SHOX2-201ENST00000389589 GMEB2Q9UKD1 530 aa23.42■■□□□ 1.34
SHOX2-201ENST00000389589 ASXL3Q9C0F0 2248 aa23.42■■□□□ 1.34
SHOX2-201ENST00000389589 A0A087WUU8 490 aa23.41■■□□□ 1.34
SHOX2-201ENST00000389589 GXYLT2A0PJZ3 443 aa23.41■■□□□ 1.34
SHOX2-201ENST00000389589 CLCA1A8K7I4 914 aa23.41■■□□□ 1.34
SHOX2-201ENST00000389589 KCNK2O95069 426 aa23.41■■□□□ 1.34
SHOX2-201ENST00000389589 PCSK6P29122 969 aa23.41■■□□□ 1.34
SHOX2-201ENST00000389589 MAPK14Q16539 360 aa23.41■■□□□ 1.34
SHOX2-201ENST00000389589 TTLL10Q6ZVT0 673 aa23.41■■□□□ 1.34
SHOX2-201ENST00000389589 GNPDA2Q8TDQ7 276 aa23.41■■□□□ 1.34
SHOX2-201ENST00000389589 GAB3Q8WWW8 586 aa23.41■■□□□ 1.34
SHOX2-201ENST00000389589 COPS4Q9BT78 406 aa23.41■■□□□ 1.34
SHOX2-201ENST00000389589 FKBP14Q9NWM8 211 aa23.41■■□□□ 1.34
SHOX2-201ENST00000389589 FBXO34Q9NWN3 711 aa23.41■■□□□ 1.34
SHOX2-201ENST00000389589 PILRBQ9UKJ0 227 aa23.41■■□□□ 1.34
SHOX2-201ENST00000389589 TTC36A6NLP5 189 aa23.4■■□□□ 1.34
SHOX2-201ENST00000389589 H3BMQ9 156 aa23.4■■□□□ 1.34
SHOX2-201ENST00000389589 PNLIPP16233 465 aa23.4■■□□□ 1.34
SHOX2-201ENST00000389589 MAOAP21397 527 aa23.4■■□□□ 1.34
SHOX2-201ENST00000389589 PSG6Q00889 435 aa23.4■■□□□ 1.34
SHOX2-201ENST00000389589 SRSF5Q13243 272 aaKnown RBP23.4■■□□□ 1.34
SHOX2-201ENST00000389589 ZNF267Q14586 743 aaPredicted RBP23.4■■□□□ 1.34
SHOX2-201ENST00000389589 DECR1Q16698 335 aa23.4■■□□□ 1.34
SHOX2-201ENST00000389589 SNAP47Q5SQN1 464 aa23.4■■□□□ 1.34
SHOX2-201ENST00000389589 PRPF38BQ5VTL8 546 aaKnown RBP23.4■■□□□ 1.34
SHOX2-201ENST00000389589 RRM2BQ7LG56 351 aa23.4■■□□□ 1.34
SHOX2-201ENST00000389589 GPR135Q8IZ08 494 aa23.4■■□□□ 1.34
SHOX2-201ENST00000389589 TRUB1Q8WWH5 349 aaKnown RBP23.4■■□□□ 1.34
SHOX2-201ENST00000389589 COG8Q96MW5 612 aa23.4■■□□□ 1.34
SHOX2-201ENST00000389589 RHNO1Q9BSD3 238 aa23.4■■□□□ 1.34
SHOX2-201ENST00000389589 CLN6Q9NWW5 311 aa23.4■■□□□ 1.34
SHOX2-201ENST00000389589 MMACHCQ9Y4U1 282 aa23.4■■□□□ 1.34
SHOX2-201ENST00000389589 SOX14O95416 240 aa23.4■■□□□ 1.34
SHOX2-201ENST00000389589 PDGFBP01127 241 aaPredicted RBP23.4■■□□□ 1.34
SHOX2-201ENST00000389589 RP1P56715 2156 aa23.4■■□□□ 1.34
SHOX2-201ENST00000389589 C12orf73Q69YU5 71 aa23.4■■□□□ 1.34
SHOX2-201ENST00000389589 ZNF730Q6ZMV8 503 aa23.4■■□□□ 1.34
SHOX2-201ENST00000389589 RAB2BQ8WUD1 216 aa23.4■■□□□ 1.34
SHOX2-201ENST00000389589 ACOT11Q8WXI4 607 aaPredicted RBP23.4■■□□□ 1.34
SHOX2-201ENST00000389589 SLC41A3Q96GZ6 507 aa23.4■■□□□ 1.34
SHOX2-201ENST00000389589 VSTM2LQ96N03 204 aa23.4■■□□□ 1.34
SHOX2-201ENST00000389589 OR1F2PQ96R84 312 aa23.4■■□□□ 1.34
SHOX2-201ENST00000389589 CENPVL1A0A0U1RR11 272 aa23.39■■□□□ 1.34
SHOX2-201ENST00000389589 A0A1B0GTQ1 180 aa23.39■■□□□ 1.34
SHOX2-201ENST00000389589 CDHR4A6H8M9 788 aa23.39■■□□□ 1.34
SHOX2-201ENST00000389589 CLDN24A6NM45 220 aa23.39■■□□□ 1.34
SHOX2-201ENST00000389589 LAMTOR5O43504 91 aa23.39■■□□□ 1.34
SHOX2-201ENST00000389589 INMTO95050 263 aa23.39■■□□□ 1.34
SHOX2-201ENST00000389589 TP53P04637 393 aaPredicted RBP23.39■■□□□ 1.34
SHOX2-201ENST00000389589 SSTR4P31391 388 aa23.39■■□□□ 1.34
SHOX2-201ENST00000389589 SNRPGP62308 76 aaKnown RBP23.39■■□□□ 1.34
SHOX2-201ENST00000389589 FUT7Q11130 342 aa23.39■■□□□ 1.34
SHOX2-201ENST00000389589 MRPL2Q5T653 305 aaKnown RBP23.39■■□□□ 1.34
SHOX2-201ENST00000389589 CASP12Q6UXS9 341 aa23.39■■□□□ 1.34
SHOX2-201ENST00000389589 KANSL1Q7Z3B3 1105 aa23.39■■□□□ 1.34
SHOX2-201ENST00000389589 C7orf57Q8NEG2 295 aa23.39■■□□□ 1.34
SHOX2-201ENST00000389589 OR1L3Q8NH93 324 aa23.39■■□□□ 1.34
SHOX2-201ENST00000389589 CCDC74AQ96AQ1 378 aa23.39■■□□□ 1.34
SHOX2-201ENST00000389589 C11orf16Q9NQ32 467 aa23.39■■□□□ 1.34
SHOX2-201ENST00000389589 WARS2Q9UGM6 360 aaKnown RBP23.39■■□□□ 1.34
SHOX2-201ENST00000389589 KCNE5Q9UJ90 142 aa23.39■■□□□ 1.34
SHOX2-201ENST00000389589 SERTAD3Q9UJW9 196 aa23.39■■□□□ 1.34
SHOX2-201ENST00000389589 NUP210LQ5VU65 1888 aa23.39■■□□□ 1.33
SHOX2-201ENST00000389589 PEX12O00623 359 aa23.39■■□□□ 1.33
SHOX2-201ENST00000389589 MYF5P13349 255 aa23.39■■□□□ 1.33
SHOX2-201ENST00000389589 ZNF136P52737 540 aa23.39■■□□□ 1.33
SHOX2-201ENST00000389589 GP2P55259 537 aaKnown RBP23.39■■□□□ 1.33
SHOX2-201ENST00000389589 HOXC5Q00444 222 aa23.39■■□□□ 1.33
SHOX2-201ENST00000389589 ROR2Q01974 943 aaKnown RBP23.39■■□□□ 1.33
SHOX2-201ENST00000389589 YOD1Q5VVQ6 348 aaPredicted RBP23.39■■□□□ 1.33
SHOX2-201ENST00000389589 GDF7Q7Z4P5 450 aa23.39■■□□□ 1.33
SHOX2-201ENST00000389589 PIGXQ8TBF5 258 aa23.39■■□□□ 1.33
SHOX2-201ENST00000389589 GGHQ92820 318 aa23.39■■□□□ 1.33
SHOX2-201ENST00000389589 NDC1Q9BTX1 674 aa23.39■■□□□ 1.33
SHOX2-201ENST00000389589 CAPN10Q9HC96 672 aa23.39■■□□□ 1.33
SHOX2-201ENST00000389589 ACOT13Q9NPJ3 140 aa23.39■■□□□ 1.33
SHOX2-201ENST00000389589 MAU2Q9Y6X3 613 aa23.39■■□□□ 1.33
SHOX2-201ENST00000389589 ADAMTS20P59510 1910 aa23.39■■□□□ 1.33
SHOX2-201ENST00000389589 TOX3O15405 576 aaPredicted RBP23.38■■□□□ 1.33
SHOX2-201ENST00000389589 FMO6PO60774 539 aa23.38■■□□□ 1.33
SHOX2-201ENST00000389589 IFNA16P05015 189 aa23.38■■□□□ 1.33
SHOX2-201ENST00000389589 ALAS2P22557 587 aa23.38■■□□□ 1.33
SHOX2-201ENST00000389589 GCGRP47871 477 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms