RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 CSNK1G3Q9Y6M4 447 aa17.89■□□□□ 0.46
GMDS-201ENST00000380805 PCDH15Q96QU1 1955 aa17.89■□□□□ 0.46
GMDS-201ENST00000380805 WDFY4Q6ZS81 3184 aa17.89■□□□□ 0.45
GMDS-201ENST00000380805 IGHV5-51A0A0C4DH38 117 aa17.89■□□□□ 0.45
GMDS-201ENST00000380805 CENPVL1A0A0U1RR11 272 aa17.89■□□□□ 0.45
GMDS-201ENST00000380805 CPSF4LA6NMK7 179 aaKnown RBP17.89■□□□□ 0.45
GMDS-201ENST00000380805 H0YIG0 161 aa17.89■□□□□ 0.45
GMDS-201ENST00000380805 ZNF749O43361 778 aa17.89■□□□□ 0.45
GMDS-201ENST00000380805 KLF4O43474 513 aa17.89■□□□□ 0.45
GMDS-201ENST00000380805 BCL10O95999 233 aa17.89■□□□□ 0.45
GMDS-201ENST00000380805 OMPP47874 163 aa17.89■□□□□ 0.45
GMDS-201ENST00000380805 CXCL12P48061 93 aa17.89■□□□□ 0.45
GMDS-201ENST00000380805 AFF3P51826 1226 aaKnown RBP17.89■□□□□ 0.45
GMDS-201ENST00000380805 POU6F2P78424 691 aaPredicted RBP17.89■□□□□ 0.45
GMDS-201ENST00000380805 ST3GAL4Q11206 333 aa17.89■□□□□ 0.45
GMDS-201ENST00000380805 FOXD4Q12950 439 aaPredicted RBP17.89■□□□□ 0.45
GMDS-201ENST00000380805 MAPK14Q16539 360 aa17.89■□□□□ 0.45
GMDS-201ENST00000380805 CCNJQ5T5M9 372 aa17.89■□□□□ 0.45
GMDS-201ENST00000380805 CASP12Q6UXS9 341 aa17.89■□□□□ 0.45
GMDS-201ENST00000380805 FAM26EQ8N5C1 309 aa17.89■□□□□ 0.45
GMDS-201ENST00000380805 TMEM105Q8N8V8 129 aa17.89■□□□□ 0.45
GMDS-201ENST00000380805 CRELD1Q96HD1 420 aa17.89■□□□□ 0.45
GMDS-201ENST00000380805 PRR14Q9BWN1 585 aa17.89■□□□□ 0.45
GMDS-201ENST00000380805 CTPS2Q9NRF8 586 aa17.89■□□□□ 0.45
GMDS-201ENST00000380805 UCKL1Q9NWZ5 548 aa17.89■□□□□ 0.45
GMDS-201ENST00000380805 KCNE5Q9UJ90 142 aa17.89■□□□□ 0.45
GMDS-201ENST00000380805 CDHR4A6H8M9 788 aa17.88■□□□□ 0.45
GMDS-201ENST00000380805 H3BMH7 237 aa17.88■□□□□ 0.45
GMDS-201ENST00000380805 NUDT21O43809 227 aaKnown RBP17.88■□□□□ 0.45
GMDS-201ENST00000380805 OR10H2O60403 315 aa17.88■□□□□ 0.45
GMDS-201ENST00000380805 MAN1A2O60476 641 aa17.88■□□□□ 0.45
GMDS-201ENST00000380805 STSP08842 583 aa17.88■□□□□ 0.45
GMDS-201ENST00000380805 GALNSP34059 522 aa17.88■□□□□ 0.45
GMDS-201ENST00000380805 GIPRP48546 466 aa17.88■□□□□ 0.45
GMDS-201ENST00000380805 CSNK1EP49674 416 aaKnown RBP17.88■□□□□ 0.45
GMDS-201ENST00000380805 NR1D2Q14995 579 aa17.88■□□□□ 0.45
GMDS-201ENST00000380805 SPCS2Q15005 226 aa17.88■□□□□ 0.45
GMDS-201ENST00000380805 MEDAGQ5VYS4 303 aa17.88■□□□□ 0.45
GMDS-201ENST00000380805 MAMSTRQ6ZN01 415 aa17.88■□□□□ 0.45
GMDS-201ENST00000380805 RASSF6Q6ZTQ3 369 aa17.88■□□□□ 0.45
GMDS-201ENST00000380805 PLEKHM3Q6ZWE6 761 aa17.88■□□□□ 0.45
GMDS-201ENST00000380805 GDF7Q7Z4P5 450 aa17.88■□□□□ 0.45
GMDS-201ENST00000380805 STX19Q8N4C7 294 aa17.88■□□□□ 0.45
GMDS-201ENST00000380805 OR52R1Q8NGF1 315 aa17.88■□□□□ 0.45
GMDS-201ENST00000380805 PIK3R3Q92569 461 aa17.88■□□□□ 0.45
GMDS-201ENST00000380805 SLC41A3Q96GZ6 507 aa17.88■□□□□ 0.45
GMDS-201ENST00000380805 ZNF578Q96N58 590 aaPredicted RBP17.88■□□□□ 0.45
GMDS-201ENST00000380805 TGM7Q96PF1 710 aa17.88■□□□□ 0.45
GMDS-201ENST00000380805 SELENONQ9NZV5 590 aa17.88■□□□□ 0.45
GMDS-201ENST00000380805 HCN3Q9P1Z3 774 aa17.88■□□□□ 0.45
GMDS-201ENST00000380805 SEMA5BQ9P283 1151 aa17.88■□□□□ 0.45
GMDS-201ENST00000380805 RNF215Q9Y6U7 377 aa17.88■□□□□ 0.45
GMDS-201ENST00000380805 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.87■□□□□ 0.45
GMDS-201ENST00000380805 M0R082 166 aa17.87■□□□□ 0.45
GMDS-201ENST00000380805 BCAT2O15382 392 aaPredicted RBP17.87■□□□□ 0.45
GMDS-201ENST00000380805 ENTPD6O75354 484 aa17.87■□□□□ 0.45
GMDS-201ENST00000380805 INHBBP09529 407 aa17.87■□□□□ 0.45
GMDS-201ENST00000380805 ADORA3P0DMS8 318 aa17.87■□□□□ 0.45
GMDS-201ENST00000380805 FPR3P25089 353 aa17.87■□□□□ 0.45
GMDS-201ENST00000380805 EMDP50402 254 aa17.87■□□□□ 0.45
GMDS-201ENST00000380805 HSD17B7P56937 341 aa17.87■□□□□ 0.45
GMDS-201ENST00000380805 PSG6Q00889 435 aa17.87■□□□□ 0.45
GMDS-201ENST00000380805 DCTN2Q13561 401 aaKnown RBP17.87■□□□□ 0.45
GMDS-201ENST00000380805 COL9A2Q14055 689 aaPredicted RBP17.87■□□□□ 0.45
GMDS-201ENST00000380805 GPR68Q15743 365 aa17.87■□□□□ 0.45
GMDS-201ENST00000380805 WDR45BQ5MNZ6 344 aa17.87■□□□□ 0.45
GMDS-201ENST00000380805 MFSD4BQ5TF39 518 aa17.87■□□□□ 0.45
GMDS-201ENST00000380805 RNLSQ5VYX0 342 aa17.87■□□□□ 0.45
GMDS-201ENST00000380805 LINC00299Q6ZSB3 139 aa17.87■□□□□ 0.45
GMDS-201ENST00000380805 BMP8AQ7Z5Y6 402 aa17.87■□□□□ 0.45
GMDS-201ENST00000380805 RANBP3LQ86VV4 465 aaPredicted RBP17.87■□□□□ 0.45
GMDS-201ENST00000380805 KIF18BQ86Y91 864 aa17.87■□□□□ 0.45
GMDS-201ENST00000380805 GPR151Q8TDV0 419 aa17.87■□□□□ 0.45
GMDS-201ENST00000380805 PEX11GQ96HA9 241 aa17.87■□□□□ 0.45
GMDS-201ENST00000380805 PRTFDC1Q9NRG1 225 aa17.87■□□□□ 0.45
GMDS-201ENST00000380805 RHPN2P1A8MT19 583 aa17.86■□□□□ 0.45
GMDS-201ENST00000380805 CLDN4O14493 209 aa17.86■□□□□ 0.45
GMDS-201ENST00000380805 SDC3O75056 442 aa17.86■□□□□ 0.45
GMDS-201ENST00000380805 TNNI3P19429 210 aa17.86■□□□□ 0.45
GMDS-201ENST00000380805 GABRA3P34903 492 aa17.86■□□□□ 0.45
GMDS-201ENST00000380805 STT3AP46977 705 aa17.86■□□□□ 0.45
GMDS-201ENST00000380805 PCYT1AP49585 367 aa17.86■□□□□ 0.45
GMDS-201ENST00000380805 SMSP52788 366 aa17.86■□□□□ 0.45
GMDS-201ENST00000380805 C21orf59P57076 290 aa17.86■□□□□ 0.45
GMDS-201ENST00000380805 ZNF155Q12901 538 aaPredicted RBP17.86■□□□□ 0.45
GMDS-201ENST00000380805 SLC13A2Q13183 592 aa17.86■□□□□ 0.45
GMDS-201ENST00000380805 GRM7Q14831 915 aa17.86■□□□□ 0.45
GMDS-201ENST00000380805 PLAG1Q6DJT9 500 aa17.86■□□□□ 0.45
GMDS-201ENST00000380805 ZNF730Q6ZMV8 503 aa17.86■□□□□ 0.45
GMDS-201ENST00000380805 MBOAT2Q6ZWT7 520 aa17.86■□□□□ 0.45
GMDS-201ENST00000380805 PRICKLE2Q7Z3G6 844 aa17.86■□□□□ 0.45
GMDS-201ENST00000380805 NKAIN4Q8IVV8 208 aa17.86■□□□□ 0.45
GMDS-201ENST00000380805 CLDN22Q8N7P3 220 aa17.86■□□□□ 0.45
GMDS-201ENST00000380805 POGLUT1Q8NBL1 392 aa17.86■□□□□ 0.45
GMDS-201ENST00000380805 PIGXQ8TBF5 258 aa17.86■□□□□ 0.45
GMDS-201ENST00000380805 DOK4Q8TEW6 326 aa17.86■□□□□ 0.45
GMDS-201ENST00000380805 RIT1Q92963 219 aa17.86■□□□□ 0.45
GMDS-201ENST00000380805 VSTM2LQ96N03 204 aa17.86■□□□□ 0.45
GMDS-201ENST00000380805 SH3GL3Q99963 347 aa17.86■□□□□ 0.45
GMDS-201ENST00000380805 FOLH1BQ9HBA9 442 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms