RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 CHCHD2Q9Y6H1 151 aaPredicted RBP17.27■□□□□ 0.35
SMN2-202ENST00000380742 NPIPA5A0A0B4J1W7 369 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 NPIPA7E9PJI5 369 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 ABCB7O75027 752 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 ICOSLGO75144 302 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 STX11O75558 287 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 NPIPA8P0DM63 369 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 CCL3P10147 92 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 CHRNEQ04844 493 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 LIPEQ05469 1076 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 EFR3AQ14156 821 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 AP1ARQ63HQ0 302 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 TYW3Q6IPR3 259 aaKnown RBP17.26■□□□□ 0.35
SMN2-202ENST00000380742 PCSK4Q6UW60 755 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 FRRS1Q6ZNA5 592 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 GOLM1Q8NBJ4 401 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 NFKBIDQ8NI38 313 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 C9orf43Q8TAL5 461 aaPredicted RBP17.26■□□□□ 0.35
SMN2-202ENST00000380742 SPPL2AQ8TCT8 520 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 PAQR8Q8TEZ7 354 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 TM9SF4Q92544 642 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 CDRT15Q96T59 188 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 SAP130Q9H0E3 1048 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 SLC38A1Q9H2H9 487 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 ZNF71Q9NQZ8 489 aaPredicted RBP17.26■□□□□ 0.35
SMN2-202ENST00000380742 ADA2Q9NZK5 511 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 PACSIN3Q9UKS6 424 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 AP3M1Q9Y2T2 418 aa17.26■□□□□ 0.35
SMN2-202ENST00000380742 TP53I11O14683 189 aa17.25■□□□□ 0.35
SMN2-202ENST00000380742 UTS2O95399 124 aa17.25■□□□□ 0.35
SMN2-202ENST00000380742 GUSBP08236 651 aa17.25■□□□□ 0.35
SMN2-202ENST00000380742 ATP6V1C1P21283 382 aa17.25■□□□□ 0.35
SMN2-202ENST00000380742 GSK3BP49841 420 aa17.25■□□□□ 0.35
SMN2-202ENST00000380742 EEFSECP57772 596 aaKnown RBP17.25■□□□□ 0.35
SMN2-202ENST00000380742 CDK6Q00534 326 aa17.25■□□□□ 0.35
SMN2-202ENST00000380742 GPR68Q15743 365 aa17.25■□□□□ 0.35
SMN2-202ENST00000380742 ZNF630Q2M218 657 aaPredicted RBP17.25■□□□□ 0.35
SMN2-202ENST00000380742 GRAMD1BQ3KR37 738 aa17.25■□□□□ 0.35
SMN2-202ENST00000380742 RPS26P11Q5JNZ5 115 aaPredicted RBP17.25■□□□□ 0.35
SMN2-202ENST00000380742 BICRALQ6AI39 1079 aa17.25■□□□□ 0.35
SMN2-202ENST00000380742 LRRC74BQ6ZQY2 392 aa17.25■□□□□ 0.35
SMN2-202ENST00000380742 ASB18Q6ZVZ8 466 aa17.25■□□□□ 0.35
SMN2-202ENST00000380742 IFNEQ86WN2 208 aa17.25■□□□□ 0.35
SMN2-202ENST00000380742 ZADH2Q8N4Q0 377 aa17.25■□□□□ 0.35
SMN2-202ENST00000380742 RBMXL3Q8N7X1 1067 aaKnown RBP17.25■□□□□ 0.35
SMN2-202ENST00000380742 OR4C3Q8NH37 302 aa17.25■□□□□ 0.35
SMN2-202ENST00000380742 REXO5Q96IC2 774 aaKnown RBP17.25■□□□□ 0.35
SMN2-202ENST00000380742 SPATA9Q9BWV2 254 aa17.25■□□□□ 0.35
SMN2-202ENST00000380742 HES7Q9BYE0 225 aa17.25■□□□□ 0.35
SMN2-202ENST00000380742 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.25■□□□□ 0.35
SMN2-202ENST00000380742 KCNE5Q9UJ90 142 aa17.25■□□□□ 0.35
SMN2-202ENST00000380742 CNOT11Q9UKZ1 510 aaKnown RBP17.25■□□□□ 0.35
SMN2-202ENST00000380742 WDR45Q9Y484 360 aa17.25■□□□□ 0.35
SMN2-202ENST00000380742 PIEZO2Q9H5I5 2752 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 PCNX3Q9H6A9 2034 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 TMEM247A6NEH6 219 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 FAM220BPB1ANY3 271 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 NPIPB9F8W1W9 429 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 ERVH48-1M5A8F1 160 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 FADS1O60427 444 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 SLC25A12O75746 678 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 LCN1P31025 176 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 CRISP3P54108 245 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 RBBP4Q09028 425 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 SCARB2Q14108 478 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 VMACQ2NL98 169 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 FLYWCH1Q4VC44 716 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 LACTB2Q53H82 288 aaPredicted RBP17.24■□□□□ 0.35
SMN2-202ENST00000380742 SLC22A10Q63ZE4 541 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 BNC2Q6ZN30 1099 aaPredicted RBP17.24■□□□□ 0.35
SMN2-202ENST00000380742 METTL25Q8N6Q8 603 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 RNF148Q8N7C7 305 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 C11orf65Q8NCR3 313 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 PSD4Q8NDX1 1056 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 OR2T12Q8NG77 320 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 GRHL3Q8TE85 626 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 RNF138Q8WVD3 245 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 ZG16BQ96DA0 208 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 TMCO6Q96DC7 493 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 SECISBP2Q96T21 854 aaKnown RBP17.24■□□□□ 0.35
SMN2-202ENST00000380742 TREX2Q9BQ50 279 aaPredicted RBP17.24■□□□□ 0.35
SMN2-202ENST00000380742 ALG2Q9H553 416 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 PROK2Q9HC23 129 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 TIMMDC1Q9NPL8 285 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 POLE3Q9NRF9 147 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 PCDHGA10Q9Y5H3 936 aa17.24■□□□□ 0.35
SMN2-202ENST00000380742 DSPPQ9NZW4 1301 aa17.23■□□□□ 0.35
SMN2-202ENST00000380742 CENPVL1A0A0U1RR11 272 aa17.23■□□□□ 0.35
SMN2-202ENST00000380742 PRORSD1PA6NEY8 169 aa17.23■□□□□ 0.35
SMN2-202ENST00000380742 C5orf58C9J3I9 102 aa17.23■□□□□ 0.35
SMN2-202ENST00000380742 ADAM10O14672 748 aa17.23■□□□□ 0.35
SMN2-202ENST00000380742 HS6ST1O60243 411 aa17.23■□□□□ 0.35
SMN2-202ENST00000380742 KIAA0513O60268 411 aa17.23■□□□□ 0.35
SMN2-202ENST00000380742 ATP5HO75947 161 aa17.23■□□□□ 0.35
SMN2-202ENST00000380742 PGM3O95394 542 aa17.23■□□□□ 0.35
SMN2-202ENST00000380742 OXSR1O95747 527 aaPredicted RBP17.23■□□□□ 0.35
SMN2-202ENST00000380742 SP1P08047 785 aa17.23■□□□□ 0.35
SMN2-202ENST00000380742 TBXA2RP21731 343 aa17.23■□□□□ 0.35
SMN2-202ENST00000380742 DCTP40126 519 aa17.23■□□□□ 0.35
SMN2-202ENST00000380742 PTGDSP41222 190 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms