RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 LCORQ96JN0 433 aaPredicted RBP11.09□□□□□ -0.63
EXOSC9-202ENST00000379663 BDH2Q9BUT1 245 aa11.09□□□□□ -0.63
EXOSC9-202ENST00000379663 ZNF700Q9H0M5 742 aa11.09□□□□□ -0.63
EXOSC9-202ENST00000379663 NXF5Q9H1B4 397 aaKnown RBP11.09□□□□□ -0.63
EXOSC9-202ENST00000379663 DLL3Q9NYJ7 618 aa11.09□□□□□ -0.63
EXOSC9-202ENST00000379663 NDUFAF4Q9P032 175 aa11.09□□□□□ -0.63
EXOSC9-202ENST00000379663 DNAJB9Q9UBS3 223 aa11.09□□□□□ -0.63
EXOSC9-202ENST00000379663 CBLCQ9ULV8 474 aa11.09□□□□□ -0.63
EXOSC9-202ENST00000379663 CELSR3Q9NYQ7 3312 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 CENPVL1A0A0U1RR11 272 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 C2orf92A0A1B0GVN3 265 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 C21orf140B9A014 251 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 STMND1H3BQB6 276 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 GFRA3O60609 400 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 UGT2B17O75795 530 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 SEC24DO94855 1032 aaPredicted RBP11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 LGI1O95970 557 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 CST1P01037 141 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 IGHEP01854 428 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 TCN2P20062 427 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 TNFRSF1BP20333 461 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 MMP11P24347 488 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 EEF1A1P68104 462 aaKnown RBP11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 RNF4P78317 190 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 PSPHP78330 225 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 GABREP78334 506 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 NNATQ16517 81 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 RNF220Q5VTB9 566 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 SLC29A4Q7RTT9 530 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 ZNF605Q86T29 641 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 VRK2Q86Y07 508 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 BCORP1Q8N888 145 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 OR4D11Q8NGI4 311 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 OR52P1PQ8NH57 321 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 NUBPLQ8TB37 319 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 SPPL2AQ8TCT8 520 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 OIT3Q8WWZ8 545 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 NACC2Q96BF6 587 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 ZNF300Q96RE9 604 aaPredicted RBP11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 LMF1Q96S06 567 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 G6PC3Q9BUM1 346 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 AMBRA1Q9C0C7 1298 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 ASCL3Q9NQ33 180 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 ZNF443Q9Y2A4 671 aaPredicted RBP11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 IFT52Q9Y366 437 aa11.08□□□□□ -0.64
EXOSC9-202ENST00000379663 hCG_2039718K7EN88 272 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 PEX12O00623 359 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 SOCS6O14544 535 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 ACOX3O15254 700 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 PRKNO60260 465 aaPredicted RBP11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 RAD1O60671 282 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 SEMA7AO75326 666 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 DNAJB5O75953 348 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 DXOO77932 396 aaKnown RBP11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 DBIP07108 87 aaKnown RBP11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 NID1P14543 1247 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 OR1E2P47887 323 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 PLAURQ03405 335 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 GPR68Q15743 365 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 ZNF141Q15928 474 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 MAPK14Q16539 360 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 NRF1Q16656 503 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 ZNF311Q5JNZ3 666 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 OR2T5Q6IEZ7 315 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 KIRREL2Q6UWL6 708 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 ZNF836Q6ZNA1 936 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 HMGN2P46Q86SG4 172 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 MARCH9Q86YJ5 346 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 KBTBD2Q8IY47 623 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 PEX5LQ8IYB4 626 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 AMER2Q8N7J2 671 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 CATSPER1Q8NEC5 780 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 OR2T29Q8NH02 315 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 ELP5Q8TE02 316 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 PROX1Q92786 737 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 TP53INP1Q96A56 240 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 HSPBAP1Q96EW2 488 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 IMMP1LQ96LU5 166 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 ARHGDIGQ99819 225 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 WFDC6Q9BQY6 131 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 GPR87Q9BY21 358 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 KCND3Q9UK17 655 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 ACAD8Q9UKU7 415 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 CDV3Q9UKY7 258 aaKnown RBP11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 CNOT11Q9UKZ1 510 aaKnown RBP11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 OAZ3Q9UMX2 235 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 FARSAQ9Y285 508 aaKnown RBP11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 SH3GLB1Q9Y371 365 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 OR10H1Q9Y4A9 318 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 PCDHGA6Q9Y5G7 932 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 AKAP13Q12802 2813 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 MED13Q9UHV7 2174 aa11.07□□□□□ -0.64
EXOSC9-202ENST00000379663 TMEM200CA6NKL6 621 aa11.06□□□□□ -0.64
EXOSC9-202ENST00000379663 IL33O95760 270 aa11.06□□□□□ -0.64
EXOSC9-202ENST00000379663 IFNW1P05000 195 aa11.06□□□□□ -0.64
EXOSC9-202ENST00000379663 ZNF26P17031 533 aaPredicted RBP11.06□□□□□ -0.64
EXOSC9-202ENST00000379663 ITGA2P17301 1181 aa11.06□□□□□ -0.64
EXOSC9-202ENST00000379663 LCN1P31025 176 aa11.06□□□□□ -0.64
EXOSC9-202ENST00000379663 RPS18P62269 152 aaKnown RBP11.06□□□□□ -0.64
EXOSC9-202ENST00000379663 DNASE1L3Q13609 305 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms