RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 BOKQ9UMX3 212 aaPredicted RBP10.93□□□□□ -0.66
PCNA-201ENST00000379143 LIPT1Q9Y234 373 aa10.93□□□□□ -0.66
PCNA-201ENST00000379143 TRBV5-3A0A0A0MS03 114 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 LOC100653049A0A140TA62 436 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 TMEM247A6NEH6 219 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 PRAMEF25A6NGN4 478 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 ACOT7O00154 380 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 HMGN4O00479 90 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 ICOSLGO75144 302 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 KRT34O76011 436 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 WISP1O95388 367 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 UTS2O95399 124 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 IGKV1D-16P01601 117 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 NGFRP08138 427 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 OR12D1P0DN82 309 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 HPGDP15428 266 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 CD1EP15812 388 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 ZNF24P17028 368 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 ELAVL4P26378 380 aaKnown RBP10.92□□□□□ -0.66
PCNA-201ENST00000379143 EVI2BP34910 448 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 CRATP43155 626 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 HPCAP84074 193 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 GNA13Q14344 377 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 HYAL4Q2M3T9 481 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 TRMT5Q32P41 509 aaKnown RBP10.92□□□□□ -0.66
PCNA-201ENST00000379143 GTDC1Q4AE62 458 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 COLEC12Q5KU26 742 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 CCNJQ5T5M9 372 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 DLEU7Q6UYE1 221 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 BNC2Q6ZN30 1099 aaPredicted RBP10.92□□□□□ -0.66
PCNA-201ENST00000379143 PRICKLE2Q7Z3G6 844 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 MTERF4Q7Z6M4 381 aaKnown RBP10.92□□□□□ -0.66
PCNA-201ENST00000379143 RETREG3Q86VR2 466 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 SLC22A16Q86VW1 577 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 SNX32Q86XE0 403 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 ZNF527Q8NB42 609 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 CPT1CQ8TCG5 803 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 PNPT1Q8TCS8 783 aaKnown RBP10.92□□□□□ -0.66
PCNA-201ENST00000379143 GRHL3Q8TE85 626 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 RNF138Q8WVD3 245 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 FAR1Q8WVX9 515 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 OIT3Q8WWZ8 545 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 TMEM41AQ96HV5 264 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 ZNF597Q96LX8 424 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 NODALQ96S42 347 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 SDF2Q99470 211 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 CGREF1Q99674 301 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 TBL1XR1Q9BZK7 514 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 IL1RL2Q9HB29 575 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 ZFP64Q9NPA5 681 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 UBQLN4Q9NRR5 601 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 DEPPQ9NTK1 212 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 GID8Q9NWU2 228 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 SLC25A37Q9NYZ2 338 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 SLAMF8Q9P0V8 285 aa10.92□□□□□ -0.66
PCNA-201ENST00000379143 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.92□□□□□ -0.66
PCNA-201ENST00000379143 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.92□□□□□ -0.66
PCNA-201ENST00000379143 NUP214P35658 2090 aaPredicted RBP10.92□□□□□ -0.66
PCNA-201ENST00000379143 BSNQ9UPA5 3926 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 G3V3Y1 287 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 FBP2O00757 339 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 SCDO00767 359 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 NDUFAB1O14561 156 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 MRASO14807 208 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 FADS1O60427 444 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 TRIM3O75382 744 aaPredicted RBP10.91□□□□□ -0.66
PCNA-201ENST00000379143 UNC5CO95185 931 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 TBXA2RP21731 343 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 PRDX6P30041 224 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 MASP1P48740 699 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 DNASE1L1P49184 302 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 MVDP53602 400 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 MLLT10P55197 1068 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 CASP9P55211 416 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 DSTNP60981 165 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 ALDH6A1Q02252 535 aaKnown RBP10.91□□□□□ -0.66
PCNA-201ENST00000379143 PLGLB1Q02325 96 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 RGNQ15493 299 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 FLYWCH1Q4VC44 716 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 RUNDC3AQ59EK9 446 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.91□□□□□ -0.66
PCNA-201ENST00000379143 AP1ARQ63HQ0 302 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 DESI1Q6ICB0 168 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 MSRB3Q8IXL7 192 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 CCDC197Q8NCU1 140 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 BCAS4Q8TDM0 211 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 NR4A3Q92570 626 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 PMM1Q92871 262 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 RAB8BQ92930 207 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 ROPN1LQ96C74 230 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 NTNG2Q96CW9 530 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 AURKBQ96GD4 344 aaPredicted RBP10.91□□□□□ -0.66
PCNA-201ENST00000379143 ANKRD27Q96NW4 1050 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 TRNT1Q96Q11 434 aaKnown RBP10.91□□□□□ -0.66
PCNA-201ENST00000379143 TAAR6Q96RI8 345 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 BARD1Q99728 777 aaKnown RBP10.91□□□□□ -0.66
PCNA-201ENST00000379143 SH3GL1Q99961 368 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 ZNF350Q9GZX5 532 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 PROK2Q9HC23 129 aa10.91□□□□□ -0.66
PCNA-201ENST00000379143 OLAHQ9NV23 265 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms